RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 NECAP2Q9NVZ3 263 aa13.19□□□□□ -0.3
PDLIM2-217ENST00000491330 A0A1W2PP11 408 aa13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 A0A1W2PPE3 182 aa13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 UBE2QL1A1L167 161 aa13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 NUDT19A8MXV4 375 aa13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 MPIG6BO95866 241 aa13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 MOSP00540 346 aa13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 HTR2CP28335 458 aa13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 BEAN1Q3B7T3 259 aa13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 NKAPLQ5M9Q1 402 aa13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 LRRTM1Q86UE6 522 aa13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 WIPF2Q8TF74 440 aaPredicted RBP13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 GALMQ96C23 342 aa13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 RCC1LQ96I51 464 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 URM1Q9BTM9 101 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 TMEM59Q9BXS4 323 aa13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 CHMP1AQ9HD42 196 aaPredicted RBP13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 LIN7CQ9NUP9 197 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-217ENST00000491330 C12orf77C9JDV5 145 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 C15orf65H3BRN8 121 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 AP4M1O00189 453 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 SLC22A1O15245 554 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 HBZP02008 142 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 REG1BP48304 166 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 KPRPQ5T749 579 aaPredicted RBP13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 OR2W3Q7Z3T1 314 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 IZUMO1Q8IYV9 350 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 C5orf56Q8N8D9 126 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 RTN4IP1Q8WWV3 396 aaPredicted RBP13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 FAM46BQ96A09 425 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 MCRIP2Q9BUT9 160 aaKnown RBP13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 RIMS4Q9H426 269 aaPredicted RBP13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 TAF9BQ9HBM6 251 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 STEAP1Q9UHE8 339 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 PKD1L1Q8TDX9 2849 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 WNK1Q9H4A3 2382 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 MEGF8Q7Z7M0 2845 aa13.17□□□□□ -0.3
PDLIM2-217ENST00000491330 IGHV3-43A0A0B4J1X8 118 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 PDCD5O14737 125 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 IGHV3-43DP0DP04 118 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 GP2P55259 537 aaKnown RBP13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 EBI3Q14213 229 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 OXLD1Q5BKU9 147 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 HIST2H2BDQ6DRA6 164 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 TEX38Q6PEX7 206 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 SLC25A48Q6ZT89 311 aaKnown RBP13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 WFDC9Q8NEX5 89 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 EAF1Q96JC9 268 aaPredicted RBP13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 TM2D1Q9BX74 207 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 PLGRKTQ9HBL7 147 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 PLEKHJ1Q9NW61 149 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 NDUFB11Q9NX14 153 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 JPT1Q9UK76 154 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 MGAT4AQ9UM21 535 aa13.16□□□□□ -0.3
PDLIM2-217ENST00000491330 SH2D7A6NKC9 451 aaPredicted RBP13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 SLC17A2O00624 439 aa13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 OR5H8P0DN80 308 aa13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 LOXL3P58215 753 aa13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 RPS27AP62979 156 aaKnown RBP13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 MRPS15P82914 257 aaKnown RBP13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 HTD2P86397 168 aa13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 CD200R1LQ6Q8B3 271 aa13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 TMEM91Q6ZNR0 172 aa13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 TMEM104Q8NE00 496 aa13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 OR10V1Q8NGI7 309 aa13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 UBALD1Q8TB05 177 aa13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 MRAPQ8TCY5 172 aa13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 TMEM203Q969S6 136 aa13.15□□□□□ -0.3
PDLIM2-217ENST00000491330 IGHV3-72A0A0B4J1Y9 119 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 TRAV1-2A0A0B4J238 106 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 TMEM14DPA8MWL7 114 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 IGHG2P01859 326 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 AMY1AP04745 511 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 AMY2AP04746 511 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 VSIG8P0DPA2 414 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 VDAC1P21796 283 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 DIAPH2-AS1Q14236 149 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 PNLIPRP3Q17RR3 467 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 FBLN7Q53RD9 439 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 CXorf66Q5JRM2 361 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 FAM27D1Q5T7N8 215 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 UBE2UQ5VVX9 321 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 MOB1BQ7L9L4 216 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 OR2AK2Q8NG84 335 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 OR1L1Q8NH94 360 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 ABHD14AQ9BUJ0 271 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 ABCG5Q9H222 651 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 GHITMQ9H3K2 345 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 MBNL3Q9NUK0 354 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 ZNF581Q9P0T4 197 aa13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 RRP15Q9Y3B9 282 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-217ENST00000491330 TRDV1A0A1B0GX56 115 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 ADARB2-AS1A8MUL3 147 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 LANCL1O43813 399 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 YPEL1O60688 119 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 ARSBP15848 533 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 RCC1P18754 421 aaPredicted RBP13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 MYL9P24844 172 aa13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 CALRP27797 417 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-217ENST00000491330 SOX6P35712 828 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms