RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 ZNF230Q9UIE0 474 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 POMT1Q9Y6A1 747 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 CEPT1Q9Y6K0 416 aa11.61□□□□□ -0.55
SRGAP3-208ENST00000490348 IGKV1-6A0A0C4DH72 117 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 TMEM235A6NFC5 223 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 H3BUX3 64 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 TRIM77I1YAP6 450 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 TOR1AO14656 332 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 SCTP09683 121 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 PPP1CCP36873 323 aaKnown RBP11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 RAB13P51153 203 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 RORCP51449 518 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 PRRX1P54821 245 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 HTD2P86397 168 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 CT45A1Q5HYN5 189 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 HACD4Q5VWC8 232 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 SAMD12Q8N8I0 201 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 CT45A3Q8NHU0 189 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 MAFIPQ8WZ33 124 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 ISOC1Q96CN7 298 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 C19orf24Q9BVV8 132 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 OR2S2Q9NQN1 319 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 GNG12Q9UBI6 72 aa11.6□□□□□ -0.55
SRGAP3-208ENST00000490348 IGKV1D-8A0A087WSZ0 117 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 H3BMQ9 156 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 SSX5O60225 188 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 CD3GP09693 182 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 HLA-DRB3P79483 266 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 HERPUD1Q15011 391 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 AANATQ16613 207 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 LRRC75BQ2VPJ9 315 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 TMEM30BQ3MIR4 351 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 MORN2Q502X0 79 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 FBLN7Q53RD9 439 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 UBE2NLQ5JXB2 153 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 TPTE2P1Q5T6R2 138 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 C16orf87Q6PH81 154 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 IZUMO1Q8IYV9 350 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 C8orf31Q8N9H6 132 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 DTX3Q8N9I9 347 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 NUDCD2Q8WVJ2 157 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 IL1F10Q8WWZ1 152 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 TMEM158Q8WZ71 300 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 GALMQ96C23 342 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 PARP12Q9H0J9 701 aaKnown RBP11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 COMMD3Q9UBI1 195 aa11.59□□□□□ -0.55
SRGAP3-208ENST00000490348 TRAV18A0A075B6X5 111 aa11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 POM121CA8CG34 1229 aa11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 RNF212BA8MTL3 300 aa11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 LEUTXA8MZ59 168 aa11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 SCGNO76038 276 aa11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 EIF4EP06730 217 aaKnown RBP11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 GSTP1P09211 210 aaKnown RBP11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 PTHLHP12272 177 aa11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 SLC25A48Q6ZT89 311 aaKnown RBP11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 LINC00311Q8N616 119 aa11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 BCL7BQ9BQE9 202 aa11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 RBM38Q9H0Z9 239 aaKnown RBP11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 DPAGT1Q9H3H5 408 aa11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 RAB9BQ9NP90 201 aa11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 OR1A1Q9P1Q5 309 aa11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 JPT1Q9UK76 154 aa11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 VPREB3Q9UKI3 123 aa11.58□□□□□ -0.55
SRGAP3-208ENST00000490348 A0A0A6YYH2 397 aa11.58□□□□□ -0.56
SRGAP3-208ENST00000490348 FAM181BA6NEQ2 426 aa11.58□□□□□ -0.56
SRGAP3-208ENST00000490348 A6NJ64 397 aa11.58□□□□□ -0.56
SRGAP3-208ENST00000490348 TRDCB7Z8K6 153 aa11.58□□□□□ -0.56
SRGAP3-208ENST00000490348 ZNF182P17025 639 aaPredicted RBP11.58□□□□□ -0.56
SRGAP3-208ENST00000490348 RELBQ01201 579 aa11.58□□□□□ -0.56
SRGAP3-208ENST00000490348 ARFRP1Q13795 201 aa11.58□□□□□ -0.56
SRGAP3-208ENST00000490348 Q3ZCU0 254 aa11.58□□□□□ -0.56
SRGAP3-208ENST00000490348 CCBE1Q6UXH8 406 aaPredicted RBP11.58□□□□□ -0.56
SRGAP3-208ENST00000490348 OR10X1Q8NGY0 326 aa11.58□□□□□ -0.56
SRGAP3-208ENST00000490348 DYNC2LI1Q8TCX1 351 aa11.58□□□□□ -0.56
SRGAP3-208ENST00000490348 ST6GALNAC6Q969X2 333 aa11.58□□□□□ -0.56
SRGAP3-208ENST00000490348 OCSTAMPQ9BR26 566 aa11.58□□□□□ -0.56
SRGAP3-208ENST00000490348 A0A1W2PPI3 338 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 XRCC3O43542 346 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 GPR137BO60478 399 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 YPEL1O60688 119 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 HPGDSO60760 199 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 GSTT2P0CG29 244 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 GSTT2BP0CG30 244 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 DYNLT3P51808 116 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 MRPS15P82914 257 aaKnown RBP11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 MADCAM1Q13477 382 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 ARL6IP1Q15041 203 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 LY6EQ16553 131 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 IGSF11Q5DX21 431 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 Q6ZS49 121 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 OR5R1Q8NH85 324 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 ACOT12Q8WYK0 555 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 CREB3L1Q96BA8 519 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 YPEL2Q96QA6 119 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 AUNIPQ9H7T9 357 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 SLC23A1Q9UHI7 598 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 MGAT4AQ9UM21 535 aa11.57□□□□□ -0.56
SRGAP3-208ENST00000490348 TRRAPQ9Y4A5 3859 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 FABP7O15540 132 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 CHST1O43916 411 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms