RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 ZNF616Q08AN1 781 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 ZP4Q12836 540 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 ZNF266Q14584 549 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 TMEM187Q14656 261 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 ODF4Q2M2E3 257 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 HYAL4Q2M3T9 481 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 PRTGQ2VWP7 1150 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 AKIRIN2Q53H80 203 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 AKR1C8PQ5T2L2 129 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 C1orf194Q5T5A4 169 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 HES3Q5TGS1 186 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 ZNF343Q6P1L6 599 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 TRAT1Q6PIZ9 186 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 DNM1P34Q6PK57 102 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 GLIPR1L1Q6UWM5 242 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 PLXDC2Q6UX71 529 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 ZNF429Q86V71 674 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 OOSP2Q86WS3 158 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 TUSC5Q8IXB3 177 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 FBXL14Q8N1E6 418 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 CYB561D1Q8N8Q1 229 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 SLC38A9Q8NBW4 561 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 CLEC18CQ8NCF0 446 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 CHST4Q8NCG5 386 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 TMEM104Q8NE00 496 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 OR5D14Q8NGL3 314 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 OR10S1Q8NGN2 331 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 OR1P1Q8NH06 330 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 OR4X1Q8NH49 305 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 MFSD8Q8NHS3 518 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 C16orf52Q8NHV5 167 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 FAM213BQ8TBF2 198 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 TMEM170AQ8WVE7 144 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 MRPL24Q96A35 216 aaKnown RBP2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 SLC25A36Q96CQ1 311 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 DDIT4LQ96D03 193 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 MSI2Q96DH6 328 aaKnown RBP2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 GNPNAT1Q96EK6 184 aaPredicted RBP2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 ADAT3Q96EY9 351 aaPredicted RBP2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 PERPQ96FX8 193 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 FER1L6-AS2Q96M78 137 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 OR6C1Q96RD1 312 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 NKX3-1Q99801 234 aaPredicted RBP2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 RARRES2Q99969 163 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 C20orf144Q9BQM9 153 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 NIPSNAP3BQ9BS92 247 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 URM1Q9BTM9 101 aaKnown RBP2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 TMEM59Q9BXS4 323 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 SH3BGRL3Q9H299 93 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 PRO1933Q9H354 126 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 P4HTMQ9NXG6 502 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 CISD1Q9NZ45 108 aaKnown RBP2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 GSKIPQ9P0R6 139 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 OR14J1Q9UGF5 321 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 DKKL1Q9UK85 242 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 RCL1Q9Y2P8 373 aaKnown RBP2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 MRPS18CQ9Y3D5 142 aaKnown RBP2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 PUS1Q9Y606 427 aaKnown RBP eCLIP2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 WSB1Q9Y6I7 421 aa2.94□□□□□ -1.94
CRNKL1-203ENST00000490258 CHD6Q8TD26 2715 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 DMXL1Q9Y485 3027 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 A0A087WZY1 265 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 TRAV34A0A0B4J273 112 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 A0A0G2JMM0 328 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 IGHV5-10-1A0A0J9YXX1 117 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 LOC101059948A0A1B0GTJ6 334 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 A0A1W2PNV4 684 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 A0A1W2PPB8 328 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 DUXBA0A1W2PPF3 345 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 A0A1W2PRS3 328 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 IGSF23A1L1A6 192 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 A4D1N5 150 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 AQP7P3A6NL99 342 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 KIR3DP1A8MWS1 328 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 LMO7DNF2Z398 122 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 M0R143 59 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 P2RY10O00398 339 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 CYB5BO43169 146 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 DLEU1O43261 78 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 DHHO43323 396 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 UTS2O95399 124 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 PRH1P02810 166 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 OR13C7P0DN81 318 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 BCL2P10415 239 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 ZNF17P17021 662 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 GLRA1P23415 457 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 ATP6V0CP27449 155 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 DUSP1P28562 367 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 ZNF93P35789 620 aaPredicted RBP2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 OR3A4PP47883 348 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 NPBWR2P48146 333 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 CSNK1A1P48729 337 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 DAP3P51398 398 aaKnown RBP2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 NOVA1P51513 510 aaKnown RBP2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 ZNF133P52736 654 aaPredicted RBP2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 ZNF121P58317 390 aaPredicted RBP2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 TAS2R30P59541 319 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 ERVFC1-1P60608 527 aa2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 CSNK2A1P68400 391 aaPredicted RBP2.93□□□□□ -1.94
CRNKL1-203ENST00000490258 SRPXP78539 464 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms