RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 GLRXP35754 106 aa13.54□□□□□ -0.24
SNX5-214ENST00000490175 TMEM88Q6PEY1 159 aa13.54□□□□□ -0.24
SNX5-214ENST00000490175 ABHD17AQ96GS6 310 aa13.54□□□□□ -0.24
SNX5-214ENST00000490175 SMIM8Q96KF7 97 aa13.54□□□□□ -0.24
SNX5-214ENST00000490175 ARV1Q9H2C2 271 aa13.54□□□□□ -0.24
SNX5-214ENST00000490175 C11orf1Q9H5F2 150 aa13.54□□□□□ -0.24
SNX5-214ENST00000490175 HEATR1Q9H583 2144 aaKnown RBP13.53□□□□□ -0.24
SNX5-214ENST00000490175 TNFSF12O43508 249 aa13.53□□□□□ -0.24
SNX5-214ENST00000490175 SERPINE2P07093 398 aa13.53□□□□□ -0.24
SNX5-214ENST00000490175 CEBPDP49716 269 aaPredicted RBP13.53□□□□□ -0.24
SNX5-214ENST00000490175 PAX5Q02548 391 aa13.53□□□□□ -0.24
SNX5-214ENST00000490175 MST1LQ2TV78 715 aa13.53□□□□□ -0.24
SNX5-214ENST00000490175 FAM90A1Q86YD7 464 aa13.53□□□□□ -0.24
SNX5-214ENST00000490175 PRR18Q8N4B5 295 aa13.53□□□□□ -0.24
SNX5-214ENST00000490175 ERGIC1Q969X5 290 aa13.53□□□□□ -0.24
SNX5-214ENST00000490175 GPHA2Q96T91 129 aa13.53□□□□□ -0.24
SNX5-214ENST00000490175 SEBOXQ9HB31 216 aaPredicted RBP13.53□□□□□ -0.24
SNX5-214ENST00000490175 UFSP2Q9NUQ7 469 aa13.53□□□□□ -0.24
SNX5-214ENST00000490175 ZDHHC8Q9ULC8 765 aa13.53□□□□□ -0.24
SNX5-214ENST00000490175 IGLV2-14P01704 120 aa13.52□□□□□ -0.24
SNX5-214ENST00000490175 CFHR2P36980 270 aa13.52□□□□□ -0.24
SNX5-214ENST00000490175 CEACAM6P40199 344 aa13.52□□□□□ -0.24
SNX5-214ENST00000490175 HOXA1P49639 335 aaPredicted RBP13.52□□□□□ -0.24
SNX5-214ENST00000490175 SULT1A2P50226 295 aa13.52□□□□□ -0.24
SNX5-214ENST00000490175 CAV2P51636 162 aa13.52□□□□□ -0.24
SNX5-214ENST00000490175 NKX6-1P78426 367 aaPredicted RBP13.52□□□□□ -0.24
SNX5-214ENST00000490175 SRSF3P84103 164 aaKnown RBP13.52□□□□□ -0.24
SNX5-214ENST00000490175 OR2Z1Q8NG97 314 aa13.52□□□□□ -0.24
SNX5-214ENST00000490175 GALMQ96C23 342 aa13.52□□□□□ -0.24
SNX5-214ENST00000490175 TOLLIPQ9H0E2 274 aa13.52□□□□□ -0.24
SNX5-214ENST00000490175 ARID1AO14497 2285 aa13.52□□□□□ -0.25
SNX5-214ENST00000490175 A8MXE2 369 aa13.52□□□□□ -0.25
SNX5-214ENST00000490175 KLF3P57682 345 aaPredicted RBP13.52□□□□□ -0.25
SNX5-214ENST00000490175 RPS23P62266 143 aaKnown RBP13.52□□□□□ -0.25
SNX5-214ENST00000490175 ID3Q02535 119 aa13.52□□□□□ -0.25
SNX5-214ENST00000490175 FOXC1Q12948 553 aa13.52□□□□□ -0.25
SNX5-214ENST00000490175 OR2C3Q8N628 320 aa13.52□□□□□ -0.25
SNX5-214ENST00000490175 LRRC29Q8WV35 223 aa13.52□□□□□ -0.25
SNX5-214ENST00000490175 SMIM3Q9BZL3 60 aa13.52□□□□□ -0.25
SNX5-214ENST00000490175 HRH4Q9H3N8 390 aa13.52□□□□□ -0.25
SNX5-214ENST00000490175 LIN7CQ9NUP9 197 aaKnown RBP13.52□□□□□ -0.25
SNX5-214ENST00000490175 RBM7Q9Y580 266 aaKnown RBP13.52□□□□□ -0.25
SNX5-214ENST00000490175 ASPMQ8IZT6 3477 aa13.52□□□□□ -0.25
SNX5-214ENST00000490175 PRR14LQ5THK1 2151 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 A0A1B0GU03 582 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 RNF212BA8MTL3 300 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 PRRG2O14669 202 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 OR3A1P47881 315 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 TDGF1P3P51864 188 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 CBLN2Q8IUK8 224 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 ZBTB34Q8NCN2 500 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 OR51H1Q8NH63 302 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 LSM10Q969L4 123 aaKnown RBP13.51□□□□□ -0.25
SNX5-214ENST00000490175 PLEKHF2Q9H8W4 249 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 DUSP13Q9UII6 198 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 TP53TG5Q9Y2B4 290 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 AKAP13Q12802 2813 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 C12orf77C9JDV5 145 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 COL10A1Q03692 680 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 MSMO1Q15800 293 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 TRAT1Q6PIZ9 186 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 SPACA3Q8IXA5 215 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 COQ2Q96H96 371 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 LURAP1Q96LR2 239 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 GINS3Q9BRX5 216 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 SLC25A31Q9H0C2 315 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 BIN3Q9NQY0 253 aa13.51□□□□□ -0.25
SNX5-214ENST00000490175 CFAP47Q6ZTR5 3102 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 IGLV3-9A0A075B6K5 115 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 SRRM5B3KS81 715 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 OR8U9P0C7N5 309 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 SEC11BP0C7V7 166 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 PSG2P11465 335 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 IL2RGP31785 369 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 RAB13P51153 203 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 POLR2GP62487 172 aaKnown RBP eCLIP13.5□□□□□ -0.251e-16■□□□□ 9.1
SNX5-214ENST00000490175 VAMP2P63027 116 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 EWSR1Q01844 656 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNX5-214ENST00000490175 AESQ08117 197 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 MSMPQ1L6U9 139 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 MRGPRGQ86SM5 289 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 OR8U1Q8NH10 309 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 TMEM231Q9H6L2 316 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 LYRM2Q9NU23 88 aaPredicted RBP13.5□□□□□ -0.25
SNX5-214ENST00000490175 KCNS2Q9ULS6 477 aa13.5□□□□□ -0.25
SNX5-214ENST00000490175 RNASEK-C17orf49H0YIS7 233 aa13.49□□□□□ -0.25
SNX5-214ENST00000490175 PITX3O75364 302 aa13.49□□□□□ -0.25
SNX5-214ENST00000490175 MED6O75586 246 aa13.49□□□□□ -0.25
SNX5-214ENST00000490175 GABRA2P47869 451 aa13.49□□□□□ -0.25
SNX5-214ENST00000490175 NPBWR1P48145 328 aa13.49□□□□□ -0.25
SNX5-214ENST00000490175 CXorf66Q5JRM2 361 aaPredicted RBP13.49□□□□□ -0.25
SNX5-214ENST00000490175 KRBOX4Q5JUW0 171 aa13.49□□□□□ -0.25
SNX5-214ENST00000490175 LRP11Q86VZ4 500 aa13.49□□□□□ -0.25
SNX5-214ENST00000490175 DOLPP1Q86YN1 238 aa13.49□□□□□ -0.25
SNX5-214ENST00000490175 OR1L1Q8NH94 360 aa13.49□□□□□ -0.25
SNX5-214ENST00000490175 TMEM171Q8WVE6 324 aa13.49□□□□□ -0.25
SNX5-214ENST00000490175 BSCL2Q96G97 398 aaPredicted RBP13.49□□□□□ -0.25
SNX5-214ENST00000490175 COL25A1Q9BXS0 654 aaPredicted RBP13.49□□□□□ -0.25
SNX5-214ENST00000490175 WFDC1Q9HC57 220 aa13.49□□□□□ -0.25
SNX5-214ENST00000490175 PARP11Q9NR21 331 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms