RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 ATP5J2P56134 94 aa11.69□□□□□ -0.54
VPS26A-205ENST00000489656 DHODHQ02127 395 aa11.69□□□□□ -0.54
VPS26A-205ENST00000489656 CARTPTQ16568 116 aa11.69□□□□□ -0.54
VPS26A-205ENST00000489656 LY6G6FQ5SQ64 297 aa11.69□□□□□ -0.54
VPS26A-205ENST00000489656 WDR25Q64LD2 544 aaPredicted RBP11.69□□□□□ -0.54
VPS26A-205ENST00000489656 LPCAT3Q6P1A2 487 aa11.69□□□□□ -0.54
VPS26A-205ENST00000489656 SLC38A6Q8IZM9 456 aa11.69□□□□□ -0.54
VPS26A-205ENST00000489656 PRR18Q8N4B5 295 aa11.69□□□□□ -0.54
VPS26A-205ENST00000489656 OR52M1Q8NGK5 317 aa11.69□□□□□ -0.54
VPS26A-205ENST00000489656 RTBDNQ9BSG5 229 aaPredicted RBP11.69□□□□□ -0.54
VPS26A-205ENST00000489656 RSRP1Q9BUV0 290 aa11.69□□□□□ -0.54
VPS26A-205ENST00000489656 GAL3ST2Q9H3Q3 398 aa11.69□□□□□ -0.54
VPS26A-205ENST00000489656 PTPN13Q12923 2485 aa11.69□□□□□ -0.54
VPS26A-205ENST00000489656 CENPEQ02224 2701 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 A0A0A6YYJ9 748 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 ITGB1BP1O14713 200 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 HSPA12AO43301 675 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 PGAM2P15259 253 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 CEACAM6P40199 344 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 DLX6P56179 175 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 LOXL3P58215 753 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 ZNF273Q14593 569 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 TMEM200BQ69YZ2 307 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 UBALD1Q8TB05 177 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 C10orf105Q8TEF2 133 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 H1FXQ92522 213 aaKnown RBP11.68□□□□□ -0.54
VPS26A-205ENST00000489656 ZNF714Q96N38 554 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 GPN1Q9HCN4 374 aaPredicted RBP11.68□□□□□ -0.54
VPS26A-205ENST00000489656 RDH8Q9NYR8 311 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 IDI2-AS1Q9NZ38 188 aa11.68□□□□□ -0.54
VPS26A-205ENST00000489656 C14orf166Q9Y224 244 aaKnown RBP11.68□□□□□ -0.54
VPS26A-205ENST00000489656 IGKV1D-13A0A0B4J2D9 117 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 VWC2LB2RUY7 222 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 YPEL1O60688 119 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 RGS11O94810 467 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 IGHV2-5P01817 119 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 OR4E1P0C645 316 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 TRAPPC2P0DI81 140 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 TRAPPC2BP0DI82 140 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 IGKV1-13P0DP09 117 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 LUMP51884 338 aaPredicted RBP11.67□□□□□ -0.54
VPS26A-205ENST00000489656 DSCR9P59020 149 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 FXYD4P59646 89 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 BAMBIQ13145 260 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 MSMO1Q15800 293 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 TMEM128Q5BJH2 165 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 ZNF626Q68DY1 528 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 HEPN1Q6WQI6 88 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 TMED4Q7Z7H5 227 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 ADAD2Q8NCV1 583 aaKnown RBP11.67□□□□□ -0.54
VPS26A-205ENST00000489656 LY6G5BQ8NDX9 201 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 OR52L2PQ8NGH6 319 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 OR10V1Q8NGI7 309 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 RFESDQ8TAC1 157 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 FAM168AQ92567 244 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 NRGNQ92686 78 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 NINJ1Q92982 152 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 TOMM40LQ969M1 308 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 TMEM230Q96A57 120 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 DMRTB1Q96MA1 342 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 YPEL2Q96QA6 119 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 PIMREGQ9BSJ6 248 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 OR51J1Q9H342 316 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 OR2S2Q9NQN1 319 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 BEX4Q9NWD9 120 aaPredicted RBP11.67□□□□□ -0.54
VPS26A-205ENST00000489656 GFOD1Q9NXC2 390 aa11.67□□□□□ -0.54
VPS26A-205ENST00000489656 RPUSD1Q9UJJ7 312 aaKnown RBP11.67□□□□□ -0.54
VPS26A-205ENST00000489656 ABCA2Q9BZC7 2435 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 RBP4P02753 201 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 GNRHRP30968 328 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 KRTAP10-9P60411 292 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 RND3P61587 244 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 GNB2P62879 340 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 GNMTQ14749 295 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 Q3ZCU0 254 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 CLEC2AQ6UVW9 174 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 LDLRAD3Q86YD5 345 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 FAM185AQ8N0U4 392 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 LRRC75A-AS1Q8N1F1 130 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 CAPSLQ8WWF8 208 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 EDARADDQ8WWZ3 215 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 SEC22CQ9BRL7 303 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 SSBP3Q9BWW4 388 aaPredicted RBP11.66□□□□□ -0.54
VPS26A-205ENST00000489656 BEX2Q9BXY8 128 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 BPESC1Q9GZL8 116 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 SLC5A7Q9GZV3 580 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 BEX1Q9HBH7 125 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 APCP25054 2843 aa11.66□□□□□ -0.54
VPS26A-205ENST00000489656 A0A1W2PPH5 198 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 MEX3AA1L020 520 aaKnown RBP11.65□□□□□ -0.54
VPS26A-205ENST00000489656 HMX3A6NHT5 357 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 C17orf98A8MV24 154 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 A8MXK9 166 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 GPR31O00270 319 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 CREBL2O60519 120 aaPredicted RBP11.65□□□□□ -0.54
VPS26A-205ENST00000489656 SLC22A5O76082 557 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 PPP1CCP36873 323 aaKnown RBP11.65□□□□□ -0.54
VPS26A-205ENST00000489656 LMO4P61968 165 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 RRAS2P62070 204 aaPredicted RBP11.65□□□□□ -0.54
VPS26A-205ENST00000489656 DHRS2Q13268 280 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms