RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 AK3Q9UIJ7 227 aa13.94□□□□□ -0.18
MDC1-206ENST00000489540 MGAT4AQ9UM21 535 aa13.94□□□□□ -0.18
MDC1-206ENST00000489540 A0A1W2PPE3 182 aa13.93□□□□□ -0.18
MDC1-206ENST00000489540 FAM106CPP0CH98 169 aa13.93□□□□□ -0.18
MDC1-206ENST00000489540 SLC2A2P11168 524 aaPredicted RBP13.93□□□□□ -0.18
MDC1-206ENST00000489540 IL3RAP26951 378 aa13.93□□□□□ -0.18
MDC1-206ENST00000489540 PLA2G7Q13093 441 aa13.93□□□□□ -0.18
MDC1-206ENST00000489540 HMGN3Q15651 99 aa13.93□□□□□ -0.18
MDC1-206ENST00000489540 C16orf82Q7Z2V1 217 aa13.93□□□□□ -0.18
MDC1-206ENST00000489540 TMEM219Q86XT9 240 aa13.93□□□□□ -0.18
MDC1-206ENST00000489540 THNSL2Q86YJ6 484 aa13.93□□□□□ -0.18
MDC1-206ENST00000489540 OR8H3Q8N146 312 aa13.93□□□□□ -0.18
MDC1-206ENST00000489540 RAB3CQ96E17 227 aa13.93□□□□□ -0.18
MDC1-206ENST00000489540 DAPK2Q9UIK4 370 aa13.93□□□□□ -0.18
MDC1-206ENST00000489540 JPT1Q9UK76 154 aa13.93□□□□□ -0.18
MDC1-206ENST00000489540 A0A0B4J203 849 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 SMIM30A4D0T7 59 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 TRIM64CA6NLI5 447 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 RGS11O94810 467 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 GAPDHP04406 335 aaKnown RBP13.92□□□□□ -0.18
MDC1-206ENST00000489540 EFNB2P52799 333 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 PROK1P58294 105 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 MORN2Q502X0 79 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 PLAC9Q5JTB6 97 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 FAM53AQ6NSI3 398 aaPredicted RBP13.92□□□□□ -0.18
MDC1-206ENST00000489540 SFXN4Q6P4A7 337 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 C11orf88Q6PI97 169 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 SLC25A48Q6ZT89 311 aaKnown RBP13.92□□□□□ -0.18
MDC1-206ENST00000489540 OR10V1Q8NGI7 309 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 OR10R2Q8NGX6 335 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 SETD6Q8TBK2 473 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 AKR1E2Q96JD6 320 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 CMSS1Q9BQ75 279 aaKnown RBP13.92□□□□□ -0.18
MDC1-206ENST00000489540 CENPOQ9BU64 300 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 RNF167Q9H6Y7 350 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 C12orf4Q9NQ89 552 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 ANK2Q01484 3957 aa13.92□□□□□ -0.18
MDC1-206ENST00000489540 FAM90A9PA6NNJ1 464 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 YPEL1O60688 119 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 CD24P25063 80 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 MRPS15P82914 257 aaKnown RBP13.91□□□□□ -0.18
MDC1-206ENST00000489540 ZNF816Q0VGE8 651 aaPredicted RBP13.91□□□□□ -0.18
MDC1-206ENST00000489540 CT45A1Q5HYN5 189 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 LY6G6FQ5SQ64 297 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 ZNF439Q8NDP4 499 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 OR52L2PQ8NGH6 319 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 OR2T6Q8NHC8 308 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 CT45A3Q8NHU0 189 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 SGMS2Q8NHU3 365 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 CAPSLQ8WWF8 208 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 WFDC12Q8WWY7 111 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 YIPF6Q96EC8 236 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 YPEL2Q96QA6 119 aa13.91□□□□□ -0.18
MDC1-206ENST00000489540 RAB27BO00194 218 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 HSD17B6O14756 317 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 TIMM23O14925 209 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 AIREO43918 545 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 TMEM127O75204 238 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 LPLP06858 475 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 ZNF134P52741 427 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 MXD1Q05195 221 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 DIAPH2-AS1Q14236 149 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 ARL6IP1Q15041 203 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 Q8N2B8 174 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 HDHD3Q9BSH5 251 aaPredicted RBP13.9□□□□□ -0.18
MDC1-206ENST00000489540 PRSS22Q9GZN4 317 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 ATG5Q9H1Y0 275 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 Q9N2K0 584 aa13.9□□□□□ -0.18
MDC1-206ENST00000489540 A0A1W2PPI3 338 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 SERPINE3A8MV23 424 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 SLC31A2O15432 143 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 SCGNO76038 276 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 OR2F2O95006 317 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 CD3GP09693 182 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 CLEC2LP0C7M8 214 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 ZNF137PP52743 207 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 SCAND1P57086 179 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 MOGAT2Q3SYC2 334 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 DRAM1Q8N682 238 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 IL1F10Q8WWZ1 152 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 ST6GALNAC6Q969X2 333 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 RBM14Q96PK6 669 aaKnown RBP13.9□□□□□ -0.19
MDC1-206ENST00000489540 KCNK7Q9Y2U2 307 aa13.9□□□□□ -0.19
MDC1-206ENST00000489540 IGHV1-3A0A0C4DH29 117 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 M0QZK8 103 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 TXNL1O43396 289 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 HIST1H1DP16402 221 aaKnown RBP13.89□□□□□ -0.19
MDC1-206ENST00000489540 PPP1CCP36873 323 aaKnown RBP13.89□□□□□ -0.19
MDC1-206ENST00000489540 GNMTQ14749 295 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 Q6ZPA2 131 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 C5orf24Q7Z6I8 188 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 MOB3BQ86TA1 216 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 CROCCP3Q8IVE0 287 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 OR56B4Q8NH76 319 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 CFHR4Q92496 578 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 CITED1Q99966 193 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 SLC25A33Q9BSK2 321 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 ABHD14AQ9BUJ0 271 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 ZNF702PQ9H963 129 aa13.89□□□□□ -0.19
MDC1-206ENST00000489540 SIGLEC9Q9Y336 463 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms