RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 MOB3BQ86TA1 216 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 OR8H3Q8N146 312 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 FAM89BQ8N5H3 189 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 LINC00311Q8N616 119 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 DRAM1Q8N682 238 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 C8orf31Q8N9H6 132 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 OR56B4Q8NH76 319 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 IL1F10Q8WWZ1 152 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 CYYR1Q96J86 154 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 SLC25A33Q9BSK2 321 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 RIMS4Q9H426 269 aaPredicted RBP10.73□□□□□ -0.69
CCL28-202ENST00000489442 ZNF696Q9H7X3 374 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 LIN7BQ9HAP6 207 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 VCX3AQ9NNX9 186 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 HSF4Q9ULV5 492 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 VWFP04275 2813 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 LOC100506127A0A0U1RQW1 187 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 SHISA3A0PJX4 238 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 SMIM30A4D0T7 59 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 M0QZ24 198 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 RGS11O94810 467 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 OR2F2O95006 317 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 TNFAIP8O95379 198 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 SNRNP70P08621 437 aaKnown RBP10.72□□□□□ -0.69
CCL28-202ENST00000489442 GADD45AP24522 165 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 REG1BP48304 166 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 KRTAP10-3P60369 221 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 BLCAPP62952 87 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 DIAPH2-AS1Q14236 149 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 HABP2Q14520 560 aaPredicted RBP10.72□□□□□ -0.69
CCL28-202ENST00000489442 FAM53AQ6NSI3 398 aaPredicted RBP10.72□□□□□ -0.69
CCL28-202ENST00000489442 MOB1BQ7L9L4 216 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 TPRA1Q86W33 373 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 KLHDC1Q8N7A1 406 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 OR52L2PQ8NGH6 319 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 ARHGAP5-AS1Q96IT6 56 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 KCTD7Q96MP8 289 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 RBM14Q96PK6 669 aaKnown RBP10.72□□□□□ -0.69
CCL28-202ENST00000489442 CHCHD6Q9BRQ6 235 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 OR51E2Q9H255 320 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 ZNF702PQ9H963 129 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 AK3Q9UIJ7 227 aa10.72□□□□□ -0.69
CCL28-202ENST00000489442 A0A087WXM4 84 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 A0A1W2PPI3 338 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 METTL21EPA6NDL7 271 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 CD36P16671 472 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 VDAC2P45880 294 aaPredicted RBP10.71□□□□□ -0.69
CCL28-202ENST00000489442 HTD2P86397 168 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 ZNF816Q0VGE8 651 aaPredicted RBP10.71□□□□□ -0.69
CCL28-202ENST00000489442 HNF4GQ14541 408 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 MORN2Q502X0 79 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 CT45A1Q5HYN5 189 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 STEAP3Q658P3 488 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 SLC25A48Q6ZT89 311 aaKnown RBP10.71□□□□□ -0.69
CCL28-202ENST00000489442 THNSL2Q86YJ6 484 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 TSPAN14Q8NG11 270 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 CT45A3Q8NHU0 189 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 RAB3CQ96E17 227 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 CMSS1Q9BQ75 279 aaKnown RBP10.71□□□□□ -0.69
CCL28-202ENST00000489442 PECRQ9BY49 303 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 JPT1Q9UK76 154 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 MGAT4AQ9UM21 535 aa10.71□□□□□ -0.69
CCL28-202ENST00000489442 IGHV1-3A0A0C4DH29 117 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 FAM90A9PA6NNJ1 464 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 NOTOA8MTQ0 251 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 M0QZK8 103 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 LDLRAD4O15165 306 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 SLC31A2O15432 143 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 NAPSAO96009 420 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 IGKV1D-33P01593 117 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 IGKV1-33P01594 117 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 CD3GP09693 182 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 SLC2A2P11168 524 aaPredicted RBP10.7□□□□□ -0.7
CCL28-202ENST00000489442 TMEM11P17152 192 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 PPP1CCP36873 323 aaKnown RBP10.7□□□□□ -0.7
CCL28-202ENST00000489442 ZNF134P52741 427 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 TMEM50BP56557 158 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 HERPUD1Q15011 391 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 HMGN3Q15651 99 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 ABCA11PQ4W5N1 156 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 C9orf152Q5JTZ5 239 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 PRR31Q5SQ13 230 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 C5orf24Q7Z6I8 188 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 TGIF2LXQ8IUE1 241 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 LYG1Q8N1E2 194 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 Q8N2B8 174 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 C11orf44Q8N8P7 122 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 OR2AK2Q8NG84 335 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 RTN4IP1Q8WWV3 396 aaPredicted RBP10.7□□□□□ -0.7
CCL28-202ENST00000489442 HDHD3Q9BSH5 251 aaPredicted RBP10.7□□□□□ -0.7
CCL28-202ENST00000489442 ABHD14AQ9BUJ0 271 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 C12orf4Q9NQ89 552 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 DAPK2Q9UIK4 370 aa10.7□□□□□ -0.7
CCL28-202ENST00000489442 A0A075B6Q4 140 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 IGHV3-72A0A0B4J1Y9 119 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 A0A0B4J203 849 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 HSPA12AO43301 675 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 TXNL1O43396 289 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 YPEL1O60688 119 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 RAB6AP20340 208 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms