RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 ZNF546Q86UE3 836 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 CLEC18CQ8NCF0 446 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 OR8H1Q8NGG4 311 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 STOML3Q8TAV4 291 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 CASTOR1Q8WTX7 329 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 GLYATL2Q8WU03 294 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 FAM222BQ8WU58 562 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 PHYHIPLQ96FC7 376 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 ABHD14BQ96IU4 210 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 AQP10Q96PS8 301 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 ZNF747Q9BV97 191 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 MFFQ9GZY8 342 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 TMEM222Q9H0R3 208 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 OR51B6Q9H340 312 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 CHMP1AQ9HD42 196 aaPredicted RBP4.64□□□□□ -1.67
ATG4A-208ENST00000489247 FAM212BQ9NTI7 297 aaPredicted RBP4.64□□□□□ -1.67
ATG4A-208ENST00000489247 ZFP57Q9NU63 452 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 COMMD9Q9P000 198 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 TAAR3PQ9P1P4 343 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 UBQLN2Q9UHD9 624 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 GLS2Q9UI32 602 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 KIF25Q9UIL4 384 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 MEMO1Q9Y316 297 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 OR2W1Q9Y3N9 320 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 TMED3Q9Y3Q3 217 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 MAB21L2Q9Y586 359 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 DOCK7Q96N67 2140 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 ARHGAP21Q5T5U3 1957 aa4.64□□□□□ -1.67
ATG4A-208ENST00000489247 A0A087WWL8 130 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 FXYD6-FXYD2A0A087WZ82 144 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 TMEM30CPA0ZSE6 113 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 ZSCAN5BA6NJL1 495 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 H0Y980 276 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 GPR31O00270 319 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 CCSO14618 274 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 MPPED1O15442 326 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 ARPC5O15511 151 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 BCL2L11O43521 198 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 ZNF737O75373 536 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 ADAP1O75689 374 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 RP2O75695 350 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 CDS2O95674 445 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 CFDP00746 253 aaPredicted RBP4.63□□□□□ -1.67
ATG4A-208ENST00000489247 HEXAP06865 529 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 SCTP09683 121 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 PET100P0DJ07 73 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 SLC25A6P12236 298 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 ZNF44P15621 663 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 DUSP1P28562 367 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 SSTR2P30874 369 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 HTR2BP41595 481 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 CA7P43166 264 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 OR3A1P47881 315 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 FABP6P51161 128 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 ZNF83P51522 516 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 KLF3P57682 345 aaPredicted RBP4.63□□□□□ -1.67
ATG4A-208ENST00000489247 UBA52P62987 128 aaKnown RBP4.63□□□□□ -1.67
ATG4A-208ENST00000489247 FAM27E3Q08E93 113 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 KLRB1Q12918 225 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 EXOSC2Q13868 293 aaKnown RBP4.63□□□□□ -1.67
ATG4A-208ENST00000489247 SLC9A3R2Q15599 337 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 GGNBP1Q5YKI7 109 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 TRAT1Q6PIZ9 186 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 TMEM108Q6UXF1 575 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 LGI3Q8N145 548 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 Q8N1X5 172 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 ST6GALNAC3Q8NDV1 305 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 THAP6Q8TBB0 222 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 PLPPR1Q8TBJ4 325 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 SCARB1Q8WTV0 552 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 RDH5Q92781 318 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 TOMM40LQ969M1 308 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 MRPL24Q96A35 216 aaKnown RBP4.63□□□□□ -1.67
ATG4A-208ENST00000489247 ZNF503Q96F45 646 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 AKR1E2Q96JD6 320 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 OR10C1Q96KK4 312 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 SNX22Q96L94 193 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 PDCD10Q9BUL8 212 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 C1QTNF6Q9BXI9 259 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 MS4A7Q9GZW8 240 aaPredicted RBP4.63□□□□□ -1.67
ATG4A-208ENST00000489247 ARL6Q9H0F7 186 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 C11orf1Q9H5F2 150 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 ASF1BQ9NVP2 202 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 LUZP4Q9P127 313 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 MBD2Q9UBB5 411 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 IL19Q9UHD0 177 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 CEP295Q9C0D2 2601 aa4.63□□□□□ -1.67
ATG4A-208ENST00000489247 ANKRD11Q6UB99 2663 aaPredicted RBP4.63□□□□□ -1.67
ATG4A-208ENST00000489247 PTPRQQ9UMZ3 2332 aa4.62□□□□□ -1.67
ATG4A-208ENST00000489247 AKAP13Q12802 2813 aa4.62□□□□□ -1.67
ATG4A-208ENST00000489247 IGKV1D-13A0A0B4J2D9 117 aa4.62□□□□□ -1.67
ATG4A-208ENST00000489247 C3orf85A0A1B0GTC6 90 aa4.62□□□□□ -1.67
ATG4A-208ENST00000489247 C5orf51A6NDU8 294 aa4.62□□□□□ -1.67
ATG4A-208ENST00000489247 OOEPA6NGQ2 149 aa4.62□□□□□ -1.67
ATG4A-208ENST00000489247 MPTX1A8MV57 137 aa4.62□□□□□ -1.67
ATG4A-208ENST00000489247 EEF1E1-BLOC1S5C9J1V9 151 aa4.62□□□□□ -1.67
ATG4A-208ENST00000489247 M0R1B8 84 aa4.62□□□□□ -1.67
ATG4A-208ENST00000489247 ITGB1BP1O14713 200 aa4.62□□□□□ -1.67
ATG4A-208ENST00000489247 HS3ST1O14792 307 aa4.62□□□□□ -1.67
ATG4A-208ENST00000489247 IFNA21P01568 189 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms