RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 C1QTNF12Q5T7M4 302 aa15.31■□□□□ 0.04
NPHP4-209ENST00000489180 PUSL1Q8N0Z8 303 aaKnown RBP15.31■□□□□ 0.04
NPHP4-209ENST00000489180 SUCLG1P53597 346 aaKnown RBP15.31■□□□□ 0.04
NPHP4-209ENST00000489180 SCGB1D4Q6XE38 83 aa15.31■□□□□ 0.04
NPHP4-209ENST00000489180 OVCH2Q7RTZ1 564 aa15.31■□□□□ 0.04
NPHP4-209ENST00000489180 PTX4Q96A99 478 aa15.31■□□□□ 0.04
NPHP4-209ENST00000489180 TBX15Q96SF7 602 aa15.31■□□□□ 0.04
NPHP4-209ENST00000489180 AP5S1Q9NUS5 200 aa15.31■□□□□ 0.04
NPHP4-209ENST00000489180 C5orf52A6NGY3 159 aa15.31■□□□□ 0.04
NPHP4-209ENST00000489180 BCL2P10415 239 aa15.31■□□□□ 0.04
NPHP4-209ENST00000489180 PSG4Q00888 419 aa15.31■□□□□ 0.04
NPHP4-209ENST00000489180 GPHA2Q96T91 129 aa15.31■□□□□ 0.04
NPHP4-209ENST00000489180 A0A0J9YW62 118 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 DXOO77932 396 aaKnown RBP15.3■□□□□ 0.04
NPHP4-209ENST00000489180 OR8B3Q8NGG8 313 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 FAM216AQ8WUB2 273 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 SLC25A38Q96DW6 304 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 PERPQ96FX8 193 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 OR8B2Q96RD0 313 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 J3QR06 171 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 MGPP08493 103 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 HOXA6P31267 233 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 SULT1A2P50226 295 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 IFITM2Q01629 132 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 RAB1CQ92928 201 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 TRPM6Q9BX84 2022 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 TRBV5-5A0A0J9YX44 114 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 IGHV4-34P06331 123 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 SCTP09683 121 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 LAMB2P55268 1798 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 EIF3GO75821 320 aaKnown RBP eCLIP15.3■□□□□ 0.04
NPHP4-209ENST00000489180 OR1L1Q8NH94 360 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 FBLIM1Q8WUP2 373 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 RBM14Q96PK6 669 aaKnown RBP15.3■□□□□ 0.04
NPHP4-209ENST00000489180 MRPL37Q9BZE1 423 aaKnown RBP15.3■□□□□ 0.04
NPHP4-209ENST00000489180 INSIG2Q9Y5U4 225 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 LOC389332A0A1B0GUA5 103 aa15.3■□□□□ 0.04
NPHP4-209ENST00000489180 EIF4E3Q8N5X7 224 aaKnown RBP15.3■□□□□ 0.04
NPHP4-209ENST00000489180 GPX7Q96SL4 187 aaPredicted RBP15.3■□□□□ 0.04
NPHP4-209ENST00000489180 ATG2BQ96BY7 2078 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 TRGC2P03986 189 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 CD1AP06126 327 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 SGMS2Q8NHU3 365 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 C4orf51C9J302 202 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 CD1BP29016 333 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 DOLPP1Q86YN1 238 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 MUC15Q8N387 334 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 ADAMTS17Q8TE56 1095 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 MFSD2BA6NFX1 497 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 DIRC3C9JPN6 131 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 NGFRP08138 427 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 FBXW9Q5XUX1 488 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 PRNTQ86SH4 94 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 LINC00596Q86U02 117 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 ABHD14BQ96IU4 210 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 WBP1LQ9NX94 342 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 SPAG17Q6Q759 2223 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 ID4P47928 161 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 VAX1Q5SQQ9 334 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 OR8I2Q8N0Y5 310 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 SLC22A18ASQ8N1D0 253 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 OR11H4Q8NGC9 324 aa15.29■□□□□ 0.04
NPHP4-209ENST00000489180 CLDN14O95500 239 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 FSTP19883 344 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 ZP4Q12836 540 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 TMUB1Q9BVT8 246 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 TTTY12Q9BZ98 90 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 H1FOOQ8IZA3 346 aaPredicted RBP15.28■□□□□ 0.04
NPHP4-209ENST00000489180 IL36RNQ9UBH0 155 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 KIF13BQ9NQT8 1826 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 MIA3Q5JRA6 1907 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 CORTO00230 105 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 HKR1P10072 659 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 PIPOXQ9P0Z9 390 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 ARFGEF1Q9Y6D6 1849 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 FAM3BP58499 235 aaPredicted RBP15.28■□□□□ 0.04
NPHP4-209ENST00000489180 COTL1Q14019 142 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 Q5BKY6 102 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 ZBTB34Q8NCN2 500 aa15.28■□□□□ 0.04
NPHP4-209ENST00000489180 TMEM210A6NLX4 147 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 F2RL2O00254 374 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 HIST1H1BP16401 226 aaKnown RBP15.27■□□□□ 0.04
NPHP4-209ENST00000489180 COX19Q49B96 90 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 TMEM252Q8N6L7 170 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 ISLRO14498 428 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 NDUFB4O95168 129 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 P2RY4P51582 365 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 NAAAQ02083 359 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 ZNF273Q14593 569 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 CXorf66Q5JRM2 361 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-209ENST00000489180 SSX8Q7RTT4 187 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 RARRES2Q99969 163 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 GPR132Q9UNW8 380 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 ZNF343Q6P1L6 599 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 WDFY1Q8IWB7 410 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 Q8WTZ3 238 aa15.27■□□□□ 0.04
NPHP4-209ENST00000489180 ZNF831Q5JPB2 1677 aa15.27■□□□□ 0.03
NPHP4-209ENST00000489180 OR4C46A6NHA9 309 aa15.27■□□□□ 0.03
NPHP4-209ENST00000489180 M0QZK8 103 aa15.27■□□□□ 0.03
NPHP4-209ENST00000489180 GGCTO75223 188 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms