RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ANKRD60Q9BZ19 345 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 DUSP21Q9H596 190 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 TPRKBQ9Y3C4 175 aa11.11□□□□□ -0.63
VTI1A-206ENST00000489142 A0A0A6YYD4 124 aa11.1□□□□□ -0.63
VTI1A-206ENST00000489142 LINC01548A6NM66 108 aa11.1□□□□□ -0.63
VTI1A-206ENST00000489142 NCBP2LA6PVI3 153 aaKnown RBP11.1□□□□□ -0.63
VTI1A-206ENST00000489142 PF4V1P10720 104 aa11.1□□□□□ -0.63
VTI1A-206ENST00000489142 CRHBPP24387 322 aa11.1□□□□□ -0.63
VTI1A-206ENST00000489142 CHATP28329 748 aa11.1□□□□□ -0.63
VTI1A-206ENST00000489142 HTR2CP28335 458 aa11.1□□□□□ -0.63
VTI1A-206ENST00000489142 PPP1CCP36873 323 aaKnown RBP11.1□□□□□ -0.63
VTI1A-206ENST00000489142 RPS27AP62979 156 aaKnown RBP11.1□□□□□ -0.63
VTI1A-206ENST00000489142 C1orf100Q5SVJ3 147 aa11.1□□□□□ -0.63
VTI1A-206ENST00000489142 SLC25A48Q6ZT89 311 aaKnown RBP11.1□□□□□ -0.63
VTI1A-206ENST00000489142 ST6GALNAC6Q969X2 333 aa11.1□□□□□ -0.63
VTI1A-206ENST00000489142 NEDD4LQ96PU5 975 aa11.1□□□□□ -0.63
VTI1A-206ENST00000489142 TMEM59Q9BXS4 323 aa11.1□□□□□ -0.63
VTI1A-206ENST00000489142 OR2S2Q9NQN1 319 aa11.1□□□□□ -0.63
VTI1A-206ENST00000489142 NOTCH3Q9UM47 2321 aa11.1□□□□□ -0.63
VTI1A-206ENST00000489142 PSMB11A5LHX3 300 aa11.09□□□□□ -0.63
VTI1A-206ENST00000489142 SERPINE3A8MV23 424 aa11.09□□□□□ -0.63
VTI1A-206ENST00000489142 UBBP0CG47 229 aa11.09□□□□□ -0.63
VTI1A-206ENST00000489142 IL3RAP26951 378 aa11.09□□□□□ -0.63
VTI1A-206ENST00000489142 Q6ZPA2 131 aa11.09□□□□□ -0.63
VTI1A-206ENST00000489142 C18orf65Q6ZTR6 163 aa11.09□□□□□ -0.63
VTI1A-206ENST00000489142 IZUMO1Q8IYV9 350 aa11.09□□□□□ -0.63
VTI1A-206ENST00000489142 C8orf31Q8N9H6 132 aa11.09□□□□□ -0.63
VTI1A-206ENST00000489142 SETD6Q8TBK2 473 aa11.09□□□□□ -0.63
VTI1A-206ENST00000489142 KCNIP1Q9NZI2 227 aa11.09□□□□□ -0.63
VTI1A-206ENST00000489142 GHRLQ9UBU3 117 aa11.09□□□□□ -0.63
VTI1A-206ENST00000489142 AK6Q9Y3D8 172 aaKnown RBP11.09□□□□□ -0.63
VTI1A-206ENST00000489142 TSSC4Q9Y5U2 329 aaPredicted RBP11.09□□□□□ -0.63
VTI1A-206ENST00000489142 SLC22A1O15245 554 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 FGF16O43320 207 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 CA11O75493 328 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 PF4P02776 101 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 CD33P20138 364 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 CLDN12P56749 244 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 QRFPP83859 136 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 FABP5Q01469 135 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 TPBGQ13641 420 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 MORN2Q502X0 79 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 TRAT1Q6PIZ9 186 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 SLC35E3Q7Z769 313 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 TGIF2LXQ8IUE1 241 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 Q8N6K4 173 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 OR2T10Q8NGZ9 312 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 HDHD3Q9BSH5 251 aaPredicted RBP11.08□□□□□ -0.64
VTI1A-206ENST00000489142 VCX3BQ9H321 246 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 PLGRKTQ9HBL7 147 aa11.08□□□□□ -0.64
VTI1A-206ENST00000489142 CHMP1AQ9HD42 196 aaPredicted RBP11.08□□□□□ -0.64
VTI1A-206ENST00000489142 MBNL3Q9NUK0 354 aaKnown RBP11.08□□□□□ -0.64
VTI1A-206ENST00000489142 TMEM14DPA8MWL7 114 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 SOCS1O15524 211 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 BPNT1O95861 308 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 GLAP06280 429 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 IGLL1P15814 213 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 CPEP16870 476 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 CALRP27797 417 aaKnown RBP11.07□□□□□ -0.64
VTI1A-206ENST00000489142 BLVRBP30043 206 aaPredicted RBP11.07□□□□□ -0.64
VTI1A-206ENST00000489142 F2RL1P55085 397 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 MLLT11Q13015 90 aaPredicted RBP11.07□□□□□ -0.64
VTI1A-206ENST00000489142 EBI3Q14213 229 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 KPRPQ5T749 579 aaPredicted RBP11.07□□□□□ -0.64
VTI1A-206ENST00000489142 PRSS48Q7RTY5 328 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 Q8N9W7 124 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 OR6M1Q8NGM8 313 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 KCNG3Q8TAE7 436 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 IL1F10Q8WWZ1 152 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 PHF21AQ96BD5 680 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 MGLLQ99685 303 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 ABHD14AQ9BUJ0 271 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 TM2D1Q9BX74 207 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 RAB9BQ9NP90 201 aa11.07□□□□□ -0.64
VTI1A-206ENST00000489142 MOSP00540 346 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 IGHG2P01859 326 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 ARSBP15848 533 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 CD1BP29016 333 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 GPR12P47775 334 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 OR3A3P47888 321 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 ZNF137PP52743 207 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 PLA2G7Q13093 441 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 HMGN3Q15651 99 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 RAB11BQ15907 218 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 TMEM30BQ3MIR4 351 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 Q3ZCU0 254 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 LCNL1Q6ZST4 164 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 ODF3L1Q8IXM7 274 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 STPG2Q8N412 459 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 SVOPQ8N4V2 548 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 MRPL20Q9BYC9 149 aaKnown RBP11.06□□□□□ -0.64
VTI1A-206ENST00000489142 LPAR5Q9H1C0 372 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 PLSCR3Q9NRY6 295 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 PLEKHJ1Q9NW61 149 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 AK3Q9UIJ7 227 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 JPT1Q9UK76 154 aa11.06□□□□□ -0.64
VTI1A-206ENST00000489142 SLC17A2O00624 439 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 ST8SIA5O15466 376 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 CD37P11049 281 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 SLC2A2P11168 524 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms