RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 TMEM30BQ3MIR4 351 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 CT45A1Q5HYN5 189 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 TCTEX1D4Q5JR98 221 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 C9orf152Q5JTZ5 239 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 SLC25A48Q6ZT89 311 aaKnown RBP19.85■□□□□ 0.77
HMGN1-217ENST00000489072 MOB3BQ86TA1 216 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 OR6M1Q8NGM8 313 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 CT45A3Q8NHU0 189 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 KCNG3Q8TAE7 436 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 NEDD4LQ96PU5 975 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 TM2D1Q9BX74 207 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 RAB9BQ9NP90 201 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 A0A0A6YYD4 124 aa19.84■□□□□ 0.77
HMGN1-217ENST00000489072 BPNT1O95861 308 aa19.84■□□□□ 0.77
HMGN1-217ENST00000489072 EMX1Q04741 257 aaPredicted RBP19.84■□□□□ 0.77
HMGN1-217ENST00000489072 EBI3Q14213 229 aa19.84■□□□□ 0.77
HMGN1-217ENST00000489072 TBCEQ15813 527 aaPredicted RBP19.84■□□□□ 0.77
HMGN1-217ENST00000489072 PDLIM3Q53GG5 364 aaPredicted RBP19.84■□□□□ 0.77
HMGN1-217ENST00000489072 C10orf99Q6UWK7 81 aa19.84■□□□□ 0.77
HMGN1-217ENST00000489072 C6orf201Q7Z4U5 140 aa19.84■□□□□ 0.77
HMGN1-217ENST00000489072 CENPVQ7Z7K6 275 aaPredicted RBP19.84■□□□□ 0.77
HMGN1-217ENST00000489072 C5orf56Q8N8D9 126 aa19.84■□□□□ 0.77
HMGN1-217ENST00000489072 RTN4IP1Q8WWV3 396 aaPredicted RBP19.84■□□□□ 0.77
HMGN1-217ENST00000489072 FAAP24Q9BTP7 215 aa19.84■□□□□ 0.77
HMGN1-217ENST00000489072 RAB26Q9ULW5 256 aa19.84■□□□□ 0.77
HMGN1-217ENST00000489072 AK6Q9Y3D8 172 aaKnown RBP19.84■□□□□ 0.77
HMGN1-217ENST00000489072 PSMA1P25786 263 aaKnown RBP19.83■□□□□ 0.77
HMGN1-217ENST00000489072 GNMTQ14749 295 aa19.83■□□□□ 0.77
HMGN1-217ENST00000489072 P2RY14Q15391 338 aa19.83■□□□□ 0.77
HMGN1-217ENST00000489072 SLC17A2O00624 439 aa19.82■□□□□ 0.76
HMGN1-217ENST00000489072 ARL6IP5O75915 188 aa19.82■□□□□ 0.76
HMGN1-217ENST00000489072 IL3RAP26951 378 aa19.82■□□□□ 0.76
HMGN1-217ENST00000489072 ZNF137PP52743 207 aa19.82■□□□□ 0.76
HMGN1-217ENST00000489072 SSX1Q16384 188 aa19.82■□□□□ 0.76
HMGN1-217ENST00000489072 Q6ZPA2 131 aa19.82■□□□□ 0.76
HMGN1-217ENST00000489072 ZNF554Q86TJ5 538 aa19.82■□□□□ 0.76
HMGN1-217ENST00000489072 IZUMO1Q8IYV9 350 aa19.82■□□□□ 0.76
HMGN1-217ENST00000489072 OR52L2PQ8NGH6 319 aa19.82■□□□□ 0.76
HMGN1-217ENST00000489072 R3HDM4Q96D70 268 aa19.82■□□□□ 0.76
HMGN1-217ENST00000489072 EAF1Q96JC9 268 aaPredicted RBP19.82■□□□□ 0.76
HMGN1-217ENST00000489072 KCNIP1Q9NZI2 227 aa19.82■□□□□ 0.76
HMGN1-217ENST00000489072 A0A1W2PRX2 142 aa19.81■□□□□ 0.76
HMGN1-217ENST00000489072 FGF16O43320 207 aa19.81■□□□□ 0.76
HMGN1-217ENST00000489072 CALRP27797 417 aaKnown RBP19.81■□□□□ 0.76
HMGN1-217ENST00000489072 MORN2Q502X0 79 aa19.81■□□□□ 0.76
HMGN1-217ENST00000489072 ZNF367Q7RTV3 350 aa19.81■□□□□ 0.76
HMGN1-217ENST00000489072 Q8N6K4 173 aa19.81■□□□□ 0.76
HMGN1-217ENST00000489072 RBMXL1Q96E39 390 aaKnown RBP19.81■□□□□ 0.76
HMGN1-217ENST00000489072 LPAR5Q9H1C0 372 aa19.81■□□□□ 0.76
HMGN1-217ENST00000489072 PLGRKTQ9HBL7 147 aa19.81■□□□□ 0.76
HMGN1-217ENST00000489072 OR2S2Q9NQN1 319 aa19.81■□□□□ 0.76
HMGN1-217ENST00000489072 BLOC1S6Q9UL45 172 aa19.81■□□□□ 0.76
HMGN1-217ENST00000489072 ZNF736B4DX44 427 aaPredicted RBP19.8■□□□□ 0.76
HMGN1-217ENST00000489072 G3V4G9 280 aa19.8■□□□□ 0.76
HMGN1-217ENST00000489072 BLVRBP30043 206 aaPredicted RBP19.8■□□□□ 0.76
HMGN1-217ENST00000489072 PPP1CCP36873 323 aaKnown RBP19.8■□□□□ 0.76
HMGN1-217ENST00000489072 OR4F17Q8NGA8 305 aa19.8■□□□□ 0.76
HMGN1-217ENST00000489072 OR4F4Q96R69 305 aa19.8■□□□□ 0.76
HMGN1-217ENST00000489072 ACOT13Q9NPJ3 140 aa19.8■□□□□ 0.76
HMGN1-217ENST00000489072 SOCS1O15524 211 aa19.79■□□□□ 0.76
HMGN1-217ENST00000489072 NAPSAO96009 420 aa19.79■□□□□ 0.76
HMGN1-217ENST00000489072 ARSBP15848 533 aa19.79■□□□□ 0.76
HMGN1-217ENST00000489072 CD1BP29016 333 aa19.79■□□□□ 0.76
HMGN1-217ENST00000489072 HMGN3Q15651 99 aa19.79■□□□□ 0.76
HMGN1-217ENST00000489072 RAB11BQ15907 218 aa19.79■□□□□ 0.76
HMGN1-217ENST00000489072 STEAP3Q658P3 488 aa19.79■□□□□ 0.76
HMGN1-217ENST00000489072 OR2W3Q7Z3T1 314 aa19.79■□□□□ 0.76
HMGN1-217ENST00000489072 TGIF2LXQ8IUE1 241 aa19.79■□□□□ 0.76
HMGN1-217ENST00000489072 JPT1Q9UK76 154 aa19.79■□□□□ 0.76
HMGN1-217ENST00000489072 TCRBV4S1A1TA0A5B7 111 aa19.78■□□□□ 0.76
HMGN1-217ENST00000489072 CLDN12P56749 244 aa19.78■□□□□ 0.76
HMGN1-217ENST00000489072 HTD2P86397 168 aa19.78■□□□□ 0.76
HMGN1-217ENST00000489072 SVOPQ8N4V2 548 aa19.78■□□□□ 0.76
HMGN1-217ENST00000489072 FAM89BQ8N5H3 189 aa19.78■□□□□ 0.76
HMGN1-217ENST00000489072 OR51D1Q8NGF3 324 aa19.78■□□□□ 0.76
HMGN1-217ENST00000489072 OR2T10Q8NGZ9 312 aa19.78■□□□□ 0.76
HMGN1-217ENST00000489072 NOL4LQ96MY1 436 aaPredicted RBP19.78■□□□□ 0.76
HMGN1-217ENST00000489072 FOXI3A8MTJ6 420 aaPredicted RBP19.77■□□□□ 0.76
HMGN1-217ENST00000489072 SAMD5Q5TGI4 173 aa19.77■□□□□ 0.76
HMGN1-217ENST00000489072 ZNF880Q6PDB4 577 aa19.77■□□□□ 0.76
HMGN1-217ENST00000489072 OR4X2Q8NGF9 303 aa19.77■□□□□ 0.76
HMGN1-217ENST00000489072 ABHD14AQ9BUJ0 271 aa19.77■□□□□ 0.76
HMGN1-217ENST00000489072 PLSCR3Q9NRY6 295 aa19.77■□□□□ 0.76
HMGN1-217ENST00000489072 PLEKHJ1Q9NW61 149 aa19.77■□□□□ 0.76
HMGN1-217ENST00000489072 SHISA3A0PJX4 238 aa19.76■□□□□ 0.75
HMGN1-217ENST00000489072 TXNL1O43396 289 aa19.76■□□□□ 0.75
HMGN1-217ENST00000489072 LANCL1O43813 399 aa19.76■□□□□ 0.75
HMGN1-217ENST00000489072 YPEL1O60688 119 aa19.76■□□□□ 0.75
HMGN1-217ENST00000489072 GABARAPL2P60520 117 aa19.76■□□□□ 0.75
HMGN1-217ENST00000489072 BEAN1Q3B7T3 259 aa19.76■□□□□ 0.75
HMGN1-217ENST00000489072 ODF3L1Q8IXM7 274 aa19.76■□□□□ 0.75
HMGN1-217ENST00000489072 Q8N9W7 124 aa19.76■□□□□ 0.75
HMGN1-217ENST00000489072 GALMQ96C23 342 aa19.76■□□□□ 0.75
HMGN1-217ENST00000489072 YPEL2Q96QA6 119 aa19.76■□□□□ 0.75
HMGN1-217ENST00000489072 HDHD3Q9BSH5 251 aaPredicted RBP19.76■□□□□ 0.75
HMGN1-217ENST00000489072 URM1Q9BTM9 101 aaKnown RBP19.76■□□□□ 0.75
HMGN1-217ENST00000489072 NDUFB11Q9NX14 153 aa19.76■□□□□ 0.75
HMGN1-217ENST00000489072 AK3Q9UIJ7 227 aa19.76■□□□□ 0.75
HMGN1-217ENST00000489072 TSSC4Q9Y5U2 329 aaPredicted RBP19.76■□□□□ 0.75
HMGN1-217ENST00000489072 V9GY05 133 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms