RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SLC9A3R2Q15599 337 aa16.13■□□□□ 0.17
CCM2-216ENST00000488727 AANATQ16613 207 aa16.13■□□□□ 0.17
CCM2-216ENST00000488727 ANKRD55Q3KP44 614 aa16.13■□□□□ 0.17
CCM2-216ENST00000488727 ELP2Q6IA86 826 aa16.13■□□□□ 0.17
CCM2-216ENST00000488727 ALKAL2Q6UX46 152 aa16.13■□□□□ 0.17
CCM2-216ENST00000488727 POC1AQ8NBT0 407 aa16.13■□□□□ 0.17
CCM2-216ENST00000488727 PCNPQ8WW12 178 aaKnown RBP16.13■□□□□ 0.17
CCM2-216ENST00000488727 NRIP2Q9BQI9 281 aa16.13■□□□□ 0.17
CCM2-216ENST00000488727 ZNF2Q9BSG1 426 aaPredicted RBP16.13■□□□□ 0.17
CCM2-216ENST00000488727 NECAP2Q9NVZ3 263 aa16.13■□□□□ 0.17
CCM2-216ENST00000488727 YLPM1P49750 1951 aaKnown RBP16.12■□□□□ 0.17
CCM2-216ENST00000488727 IGHV3OR15-7A0A075B7D8 119 aa16.12■□□□□ 0.17
CCM2-216ENST00000488727 KANTRA0A1W2PQU2 76 aa16.12■□□□□ 0.17
CCM2-216ENST00000488727 F8VVB4 439 aa16.12■□□□□ 0.17
CCM2-216ENST00000488727 F8VWA3 439 aa16.12■□□□□ 0.17
CCM2-216ENST00000488727 PGAM2P15259 253 aa16.12■□□□□ 0.17
CCM2-216ENST00000488727 GLRA1P23415 457 aa16.12■□□□□ 0.17
CCM2-216ENST00000488727 ERVK11-1P61568 191 aa16.12■□□□□ 0.17
CCM2-216ENST00000488727 LRRC37A5PQ49AS3 106 aa16.12■□□□□ 0.17
CCM2-216ENST00000488727 MAPK1IP1LQ8NDC0 245 aa16.12■□□□□ 0.17
CCM2-216ENST00000488727 DEFB108BQ8NET1 73 aa16.12■□□□□ 0.17
CCM2-216ENST00000488727 ST8SIA2Q92186 375 aa16.12■□□□□ 0.17
CCM2-216ENST00000488727 ZNF581Q9P0T4 197 aa16.12■□□□□ 0.17
CCM2-216ENST00000488727 OOEPA6NGQ2 149 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 LGALS8O00214 317 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 FSTL3O95633 263 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 OR5H8P0DN80 308 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 LYL1P12980 280 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 PI3P19957 117 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 MDH2P40926 338 aaKnown RBP16.11■□□□□ 0.17
CCM2-216ENST00000488727 TEX36Q5VZQ5 186 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 DHRS11Q6UWP2 260 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 FAM90A1Q86YD7 464 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 CLDND2Q8NHS1 167 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 MBD2Q9UBB5 411 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 H7C1Q1 480 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 SHOXO15266 292 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 ACAA1P09110 424 aaPredicted RBP16.11■□□□□ 0.17
CCM2-216ENST00000488727 FUT3P21217 361 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 USF1P22415 310 aaPredicted RBP16.11■□□□□ 0.17
CCM2-216ENST00000488727 IL2RGP31785 369 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 NPBWR2P48146 333 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 MKXQ8IYA7 352 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 PHYHIPLQ96FC7 376 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 ZNF286AQ9HBT8 521 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 HES4Q9HCC6 221 aa16.11■□□□□ 0.17
CCM2-216ENST00000488727 ABCA2Q9BZC7 2435 aa16.1■□□□□ 0.17
CCM2-216ENST00000488727 C13orf42A0A1B0GVH6 325 aa16.1■□□□□ 0.17
CCM2-216ENST00000488727 BCL3P20749 454 aa16.1■□□□□ 0.17
CCM2-216ENST00000488727 TMEM155Q4W5P6 130 aa16.1■□□□□ 0.17
CCM2-216ENST00000488727 CCDC28AQ8IWP9 274 aa16.1■□□□□ 0.17
CCM2-216ENST00000488727 SLC25A32Q9H2D1 315 aa16.1■□□□□ 0.17
CCM2-216ENST00000488727 C12orf4Q9NQ89 552 aa16.1■□□□□ 0.17
CCM2-216ENST00000488727 MED13LQ71F56 2210 aa16.09■□□□□ 0.17
CCM2-216ENST00000488727 CRYM-AS1A6NIL9 109 aa16.09■□□□□ 0.17
CCM2-216ENST00000488727 SPDEFO95238 335 aa16.09■□□□□ 0.17
CCM2-216ENST00000488727 IFNA2P01563 188 aa16.09■□□□□ 0.17
CCM2-216ENST00000488727 RLN2P04090 185 aa16.09■□□□□ 0.17
CCM2-216ENST00000488727 LOXL1Q08397 574 aaPredicted RBP16.09■□□□□ 0.17
CCM2-216ENST00000488727 ACP7Q6ZNF0 438 aa16.09■□□□□ 0.17
CCM2-216ENST00000488727 Q6ZS49 121 aa16.09■□□□□ 0.17
CCM2-216ENST00000488727 INO80EQ8NBZ0 244 aaPredicted RBP16.09■□□□□ 0.17
CCM2-216ENST00000488727 OR5T2Q8NGG2 359 aa16.09■□□□□ 0.17
CCM2-216ENST00000488727 RBPMSQ93062 196 aaKnown RBP16.09■□□□□ 0.17
CCM2-216ENST00000488727 C2orf50Q96LR7 162 aa16.09■□□□□ 0.17
CCM2-216ENST00000488727 ZANQ9Y493 2812 aa16.09■□□□□ 0.17
CCM2-216ENST00000488727 TRAV38-1A0A0B4J264 116 aa16.08■□□□□ 0.17
CCM2-216ENST00000488727 MFSD2BA6NFX1 497 aa16.08■□□□□ 0.17
CCM2-216ENST00000488727 I3L521 148 aa16.08■□□□□ 0.17
CCM2-216ENST00000488727 TNFRSF13BO14836 293 aaPredicted RBP16.08■□□□□ 0.17
CCM2-216ENST00000488727 ADAP1O75689 374 aa16.08■□□□□ 0.17
CCM2-216ENST00000488727 NXPH2O95156 264 aa16.08■□□□□ 0.17
CCM2-216ENST00000488727 TFF1P04155 84 aa16.08■□□□□ 0.17
CCM2-216ENST00000488727 MUC1P15941 1255 aaPredicted RBP16.08■□□□□ 0.17
CCM2-216ENST00000488727 FGF12P61328 243 aa16.08■□□□□ 0.17
CCM2-216ENST00000488727 LMO4P61968 165 aa16.08■□□□□ 0.17
CCM2-216ENST00000488727 IL15RAQ13261 267 aa16.08■□□□□ 0.17
CCM2-216ENST00000488727 SRSF7Q16629 238 aaKnown RBP eCLIP16.08■□□□□ 0.17
CCM2-216ENST00000488727 LYPD2Q6UXB3 125 aa16.08■□□□□ 0.17
CCM2-216ENST00000488727 DNAJB11Q9UBS4 358 aa16.08■□□□□ 0.17
CCM2-216ENST00000488727 ACANP16112 2415 aa16.08■□□□□ 0.16
CCM2-216ENST00000488727 TRAPPC2LH3BP13 241 aa16.08■□□□□ 0.16
CCM2-216ENST00000488727 GYPAP02724 150 aa16.08■□□□□ 0.16
CCM2-216ENST00000488727 ATXN7L3Q14CW9 347 aaPredicted RBP16.08■□□□□ 0.16
CCM2-216ENST00000488727 STUMQ69YW2 141 aa16.08■□□□□ 0.16
CCM2-216ENST00000488727 PRSS54Q6PEW0 395 aa16.08■□□□□ 0.16
CCM2-216ENST00000488727 SGPP2Q8IWX5 399 aa16.08■□□□□ 0.16
CCM2-216ENST00000488727 PDZD9Q8IXQ8 264 aa16.08■□□□□ 0.16
CCM2-216ENST00000488727 CXorf58Q96LI9 332 aa16.08■□□□□ 0.16
CCM2-216ENST00000488727 ARPC5LQ9BPX5 153 aa16.08■□□□□ 0.16
CCM2-216ENST00000488727 RNF126Q9BV68 326 aa16.08■□□□□ 0.16
CCM2-216ENST00000488727 RASL12Q9NYN1 266 aa16.08■□□□□ 0.16
CCM2-216ENST00000488727 IL36RNQ9UBH0 155 aa16.08■□□□□ 0.16
CCM2-216ENST00000488727 TEX13DA0A0J9YY54 714 aaPredicted RBP16.07■□□□□ 0.16
CCM2-216ENST00000488727 SMAD7O15105 426 aaKnown RBP16.07■□□□□ 0.16
CCM2-216ENST00000488727 IGHV2-5P01817 119 aa16.07■□□□□ 0.16
CCM2-216ENST00000488727 UCP3P55916 312 aa16.07■□□□□ 0.16
CCM2-216ENST00000488727 MPV17LQ2QL34 196 aa16.07■□□□□ 0.16
CCM2-216ENST00000488727 SMIM21Q3B7S5 101 aa16.07■□□□□ 0.16
CCM2-216ENST00000488727 DYRK2Q92630 601 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms