RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 ATPIF1Q9UII2 106 aa3.28□□□□□ -1.88
SRRM1-215ENST00000488317 COL5A1P20908 1838 aaPredicted RBP3.28□□□□□ -1.88
SRRM1-215ENST00000488317 CACNA1CQ13936 2221 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 PTPRSQ13332 1948 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 A0A0A6YYD5 115 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 ZNF816-ZNF321PA0A0X1KG74 233 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 ANKRD20A5PA0PJZ0 165 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 TRAPPC13A5PLN9 417 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 RIIAD1A6NNX1 92 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 HIDE1A8MVS5 230 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 H0YC42 278 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 BHLHE40O14503 412 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 MRPS12O15235 138 aaKnown RBP3.27□□□□□ -1.89
SRRM1-215ENST00000488317 CTAG2O75638 210 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 SCO1O75880 301 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 NDUFB6O95139 128 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 EPPINO95925 133 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 IFNGP01579 166 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 MT-ND4P03905 459 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 UBBP0CG47 229 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 UBCP0CG48 685 aaKnown RBP3.27□□□□□ -1.89
SRRM1-215ENST00000488317 STAG3L3P0CL85 134 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 TDGF1P13385 188 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 GABRA1P14867 456 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 PRKACAP17612 351 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 BCKDHBP21953 392 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 AGTR1P30556 359 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 CD70P32970 193 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 TDGF1P3P51864 188 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 FGF8P55075 233 aaPredicted RBP3.27□□□□□ -1.89
SRRM1-215ENST00000488317 B2MP61769 119 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 UBA52P62987 128 aaKnown RBP3.27□□□□□ -1.89
SRRM1-215ENST00000488317 SSBP1Q04837 148 aaKnown RBP3.27□□□□□ -1.89
SRRM1-215ENST00000488317 FUT5Q11128 374 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 GGTLC2Q14390 218 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 CDK5R1Q15078 307 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 SGCAQ16586 387 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 CCSMST1Q4G0I0 132 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 VAX1Q5SQQ9 334 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 ARL9Q6T311 187 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 LRRN1Q6UXK5 716 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 TMEM150AQ86TG1 271 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 COMTD1Q86VU5 262 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 PDZD9Q8IXQ8 264 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.27□□□□□ -1.89
SRRM1-215ENST00000488317 OR11G2Q8NGC1 345 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 OR6X1Q8NH79 312 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 RPS4Y2Q8TD47 263 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 IL22RA2Q969J5 263 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 SMIM19Q96E16 107 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 PGLYRP3Q96LB9 341 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 RSPO3Q9BXY4 272 aaPredicted RBP3.27□□□□□ -1.89
SRRM1-215ENST00000488317 SLC38A1Q9H2H9 487 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 RERGLQ9H628 205 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 IFT46Q9NQC8 304 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 SLC39A1Q9NY26 324 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 TAS2R8Q9NYW2 309 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 SCML1Q9UN30 329 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 SLC35A3Q9Y2D2 325 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 PHF3Q92576 2039 aaKnown RBP3.27□□□□□ -1.89
SRRM1-215ENST00000488317 LRP4O75096 1905 aa3.27□□□□□ -1.89
SRRM1-215ENST00000488317 A0A0D9SG52 128 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 PRSS37A4D1T9 235 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 CPSF4LA6NMK7 179 aaKnown RBP3.26□□□□□ -1.89
SRRM1-215ENST00000488317 FAM25EA8MYX2 175 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 MCRIP1C9JLW8 97 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 D6RAR5 112 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 PEX7O00628 323 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 TRAF3IP2O43734 574 aaPredicted RBP3.26□□□□□ -1.89
SRRM1-215ENST00000488317 CFDP00746 253 aaPredicted RBP3.26□□□□□ -1.89
SRRM1-215ENST00000488317 HMGN2P05204 90 aaKnown RBP3.26□□□□□ -1.89
SRRM1-215ENST00000488317 GUSBP08236 651 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 CD3GP09693 182 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 FOLR1P15328 257 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 MGMTP16455 207 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 CRISP2P16562 243 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 ZNF3P17036 446 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 ATF1P18846 271 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 CSNK2A2P19784 350 aaPredicted RBP3.26□□□□□ -1.89
SRRM1-215ENST00000488317 CXCL2P19875 107 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 RPS4Y1P22090 263 aaKnown RBP3.26□□□□□ -1.89
SRRM1-215ENST00000488317 RBM34P42696 430 aaKnown RBP3.26□□□□□ -1.89
SRRM1-215ENST00000488317 SSR2P43308 183 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 CBX5P45973 191 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 GPR4P46093 362 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 GDI2P50395 445 aaKnown RBP3.26□□□□□ -1.89
SRRM1-215ENST00000488317 CCR6P51684 374 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 NCBP2P52298 156 aaKnown RBP eCLIP3.26□□□□□ -1.89
SRRM1-215ENST00000488317 BTN1A1Q13410 526 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 HTR4Q13639 388 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 ZNF345Q14585 488 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 IRF4Q15306 451 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 GUCA2BQ16661 112 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 SLC25A35Q3KQZ1 300 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 ACSM3Q53FZ2 586 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 PABPC1L2AQ5JQF8 200 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 CLEC12AQ5QGZ9 265 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 LPCAT3Q6P1A2 487 aa3.26□□□□□ -1.89
SRRM1-215ENST00000488317 RPL22L1Q6P5R6 122 aaKnown RBP3.26□□□□□ -1.89
SRRM1-215ENST00000488317 TRAPPC5Q8IUR0 188 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms