RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PPIAL4DF5H284 164 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 HSPA12AO43301 675 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 PRB1P04280 392 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 WNT2P09544 360 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 DANCRP0C864 163 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 PPIAL4FP0DN26 164 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 GZMHP20718 246 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 IL2RGP31785 369 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 CEACAM6P40199 344 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 LUMP51884 338 aaPredicted RBP7.84□□□□□ -1.15
SF3B1-211ENST00000487698 HTD2P86397 168 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 IFITM2Q01629 132 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 GNMTQ14749 295 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 TCF23Q7RTU1 214 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 CCL17Q92583 94 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 ARL11Q969Q4 196 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 MSI2Q96DH6 328 aaKnown RBP7.84□□□□□ -1.15
SF3B1-211ENST00000487698 TP53RKQ96S44 253 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 CBLN4Q9NTU7 201 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 KCNIP3Q9Y2W7 256 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 PPIAL4AQ9Y536 164 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 C3orf85A0A1B0GTC6 90 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 NKX6-3A6NJ46 265 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 HSD17B6O14756 317 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 SPINT2O43291 252 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 FCN3O75636 299 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 SP6Q3SY56 376 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 GSG1LQ6UXU4 331 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 LIAT1Q6ZQX7 453 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 TBC1D26Q86UD7 250 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 DTX2Q86UW9 622 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 CMTM1Q8IZ96 169 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 OR52L2PQ8NGH6 319 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 SEC22AQ96IW7 307 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 NMES1Q9C002 83 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 TMEM222Q9H0R3 208 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 OR6C3Q9NZP0 311 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 FBXO9Q9UK97 447 aaPredicted RBP7.84□□□□□ -1.16
SF3B1-211ENST00000487698 HSPB11Q9Y547 144 aa7.84□□□□□ -1.16
SF3B1-211ENST00000487698 ARID1AO14497 2285 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 MEX3AA1L020 520 aaKnown RBP7.83□□□□□ -1.16
SF3B1-211ENST00000487698 HMSDA8MTL9 139 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 MPTX1A8MV57 137 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 FAM25EA8MYX2 175 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 F2RL2O00254 374 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 PGLYRP1O75594 196 aaPredicted RBP7.83□□□□□ -1.16
SF3B1-211ENST00000487698 C1QL1O75973 258 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 FSTL3O95633 263 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 SOD3P08294 240 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 EDDM3BP56851 147 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 IL15RAQ13261 267 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 LGALSLQ3ZCW2 172 aaPredicted RBP7.83□□□□□ -1.16
SF3B1-211ENST00000487698 FAM53AQ6NSI3 398 aaPredicted RBP7.83□□□□□ -1.16
SF3B1-211ENST00000487698 ZNF843Q8N446 348 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 ZBTB8BQ8NAP8 495 aaPredicted RBP7.83□□□□□ -1.16
SF3B1-211ENST00000487698 LHFPL5Q8TAF8 219 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 PPP1R1CQ8WVI7 109 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 AKR1E2Q96JD6 320 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 C18orf12Q96KH6 178 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 OR10C1Q96KK4 312 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 VRK1Q99986 396 aaPredicted RBP7.83□□□□□ -1.16
SF3B1-211ENST00000487698 PDCD10Q9BUL8 212 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 KAAG1Q9UBP8 84 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 DCHS2Q6V1P9 2916 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 DOCK11Q5JSL3 2073 aa7.83□□□□□ -1.16
SF3B1-211ENST00000487698 SPTAN1Q13813 2472 aaKnown RBP7.83□□□□□ -1.16
SF3B1-211ENST00000487698 C5orf51A6NDU8 294 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 TMPRSS2O15393 492 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 PHF1O43189 567 aaPredicted RBP7.82□□□□□ -1.16
SF3B1-211ENST00000487698 RP2O75695 350 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 UCP1P25874 307 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 PPP1CCP36873 323 aaKnown RBP7.82□□□□□ -1.16
SF3B1-211ENST00000487698 LOXL3P58215 753 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 CYCSP99999 105 aaKnown RBP7.82□□□□□ -1.16
SF3B1-211ENST00000487698 FGL1Q08830 312 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 MSMO1Q15800 293 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 C17orf58Q2M2W7 97 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 HFEQ30201 348 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 FGFRL1Q8N441 504 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 RFESDQ8TAC1 157 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 NINJ1Q92982 152 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 TMEM56Q96MV1 263 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 GPHA2Q96T91 129 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 TMEM246Q9BRR3 403 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 LINC00574Q9H8X3 128 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 OR2S2Q9NQN1 319 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 CALYQ9NYX4 217 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 JPT1Q9UK76 154 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 TMEM56-RWDD3S4R434 201 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 UBR5O95071 2799 aaPredicted RBP7.82□□□□□ -1.16
SF3B1-211ENST00000487698 C13orf42A0A1B0GVH6 325 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 H0Y980 276 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 HOXB5P09067 269 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 OR8U9P0C7N5 309 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 F2RP25116 425 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 SRPXP78539 464 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 GGNBP1Q5YKI7 109 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 LGI3Q8N145 548 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 DRAM1Q8N682 238 aa7.82□□□□□ -1.16
SF3B1-211ENST00000487698 OR8U1Q8NH10 309 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms