RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SH2D1BO14796 132 aa22.09■■□□□ 1.13
HLA-C-208ENST00000487245 SULT1A1P50225 295 aa22.09■■□□□ 1.13
HLA-C-208ENST00000487245 NUBP1P53384 320 aa22.09■■□□□ 1.13
HLA-C-208ENST00000487245 RPL23AP62750 156 aaKnown RBP22.09■■□□□ 1.13
HLA-C-208ENST00000487245 CCL20P78556 96 aa22.09■■□□□ 1.13
HLA-C-208ENST00000487245 ZNF146Q15072 292 aa22.09■■□□□ 1.13
HLA-C-208ENST00000487245 ABHD14AQ9BUJ0 271 aa22.09■■□□□ 1.13
HLA-C-208ENST00000487245 RFNGQ9Y644 331 aa22.09■■□□□ 1.13
HLA-C-208ENST00000487245 A0A0G2JRQ6 117 aa22.08■■□□□ 1.13
HLA-C-208ENST00000487245 TXNL1O43396 289 aa22.08■■□□□ 1.13
HLA-C-208ENST00000487245 TNFSF12O43508 249 aa22.08■■□□□ 1.13
HLA-C-208ENST00000487245 SERPINE2P07093 398 aa22.08■■□□□ 1.13
HLA-C-208ENST00000487245 COX5AP20674 150 aa22.08■■□□□ 1.13
HLA-C-208ENST00000487245 EPHA1P21709 976 aa22.08■■□□□ 1.13
HLA-C-208ENST00000487245 FIP1L1Q6UN15 594 aaKnown RBP22.08■■□□□ 1.13
HLA-C-208ENST00000487245 ZNF497Q6ZNH5 498 aa22.08■■□□□ 1.13
HLA-C-208ENST00000487245 STX12Q86Y82 276 aa22.08■■□□□ 1.13
HLA-C-208ENST00000487245 CD300LFQ8TDQ1 290 aa22.08■■□□□ 1.13
HLA-C-208ENST00000487245 C12orf57Q99622 126 aa22.08■■□□□ 1.13
HLA-C-208ENST00000487245 RARRES2Q99969 163 aa22.08■■□□□ 1.13
HLA-C-208ENST00000487245 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.07■■□□□ 1.12
HLA-C-208ENST00000487245 A0A1W2PR80 420 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 MED19A0JLT2 244 aaPredicted RBP22.07■■□□□ 1.12
HLA-C-208ENST00000487245 C5orf52A6NGY3 159 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 PRR33A8MZF0 331 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 SLC33A1O00400 549 aaPredicted RBP22.07■■□□□ 1.12
HLA-C-208ENST00000487245 OR2H2O95918 312 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 HBE1P02100 147 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 SRSF6Q13247 344 aaKnown RBP22.07■■□□□ 1.12
HLA-C-208ENST00000487245 ZNF506Q5JVG8 444 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 ZNF295-AS1Q8N0V1 137 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 CNEP1R1Q8N9A8 125 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 RBMXL1Q96E39 390 aaKnown RBP22.07■■□□□ 1.12
HLA-C-208ENST00000487245 TRAV1-1A0A0B4J248 108 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 A0A1W2PPH5 198 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 GPR37O15354 613 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 NXPH2O95156 264 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 OR13C7P0DN81 318 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 PSG2P11465 335 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 RAB5AP20339 215 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 CD200P41217 278 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 KIR2DL2P43627 348 aaPredicted RBP22.07■■□□□ 1.12
HLA-C-208ENST00000487245 PSG7Q13046 419 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 ZNF154Q13106 437 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 AKR1C8PQ5T2L2 129 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 WSB1Q9Y6I7 421 aa22.07■■□□□ 1.12
HLA-C-208ENST00000487245 IGLV2-14P01704 120 aa22.06■■□□□ 1.12
HLA-C-208ENST00000487245 SRP19P09132 144 aaKnown RBP22.06■■□□□ 1.12
HLA-C-208ENST00000487245 MEOX2P50222 304 aa22.06■■□□□ 1.12
HLA-C-208ENST00000487245 TLE4Q04727 773 aa22.06■■□□□ 1.12
HLA-C-208ENST00000487245 TESK1Q15569 626 aa22.06■■□□□ 1.12
HLA-C-208ENST00000487245 IGKV3-15P01624 115 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 HSPB1P04792 205 aaKnown RBP22.05■■□□□ 1.12
HLA-C-208ENST00000487245 ERVS71-1P61550 626 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 DOCK7Q96N67 2140 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 YPEL4Q96NS1 127 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 C20orf24Q9BUV8 137 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 OR1A1Q9P1Q5 309 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 TRAPPC2LQ9UL33 140 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 WIPI2Q9Y4P8 454 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 TTC28Q96AY4 2481 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 A6NLC8 198 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 AHRRA9YTQ3 701 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 SIRPB1O00241 398 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 UBE2CO00762 179 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 SPINK2P20155 84 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 RAB2AP61019 212 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 TMEM217Q8N7C4 229 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 WDR31Q8NA23 367 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 C9orf106Q8NAJ2 232 aa22.05■■□□□ 1.12
HLA-C-208ENST00000487245 KLF14Q8TD94 323 aaPredicted RBP22.05■■□□□ 1.12
HLA-C-208ENST00000487245 MBNL3Q9NUK0 354 aaKnown RBP22.05■■□□□ 1.12
HLA-C-208ENST00000487245 CDIPTO14735 213 aa22.04■■□□□ 1.12
HLA-C-208ENST00000487245 IGKV1-39P01597 117 aa22.04■■□□□ 1.12
HLA-C-208ENST00000487245 IGKV1D-39P04432 117 aa22.04■■□□□ 1.12
HLA-C-208ENST00000487245 OR51H1Q8NH63 302 aa22.04■■□□□ 1.12
HLA-C-208ENST00000487245 PLSCR4Q9NRQ2 329 aa22.04■■□□□ 1.12
HLA-C-208ENST00000487245 ESPL1Q14674 2120 aa22.04■■□□□ 1.12
HLA-C-208ENST00000487245 A0A1B0GV50 99 aa22.03■■□□□ 1.12
HLA-C-208ENST00000487245 SCAF4O95104 1147 aaKnown RBP22.03■■□□□ 1.12
HLA-C-208ENST00000487245 IFNA5P01569 189 aa22.03■■□□□ 1.12
HLA-C-208ENST00000487245 DAOP14920 347 aa22.03■■□□□ 1.12
HLA-C-208ENST00000487245 WT1P19544 449 aaPredicted RBP22.03■■□□□ 1.12
HLA-C-208ENST00000487245 SNRPEP62304 92 aaKnown RBP22.03■■□□□ 1.12
HLA-C-208ENST00000487245 S100A12P80511 92 aa22.03■■□□□ 1.12
HLA-C-208ENST00000487245 ICAM4Q14773 271 aa22.03■■□□□ 1.12
HLA-C-208ENST00000487245 EIF2S3LQ2VIR3 472 aaKnown RBP22.03■■□□□ 1.12
HLA-C-208ENST00000487245 OBP2BQ9NPH6 170 aa22.03■■□□□ 1.12
HLA-C-208ENST00000487245 ZNF891A8MT65 544 aaPredicted RBP22.03■■□□□ 1.12
HLA-C-208ENST00000487245 RUNX1Q01196 453 aa22.03■■□□□ 1.12
HLA-C-208ENST00000487245 IGFBP7Q16270 282 aa22.03■■□□□ 1.12
HLA-C-208ENST00000487245 ALKBH6Q3KRA9 238 aa22.03■■□□□ 1.12
HLA-C-208ENST00000487245 C1QL4Q86Z23 238 aa22.03■■□□□ 1.12
HLA-C-208ENST00000487245 OR10G4Q8NGN3 311 aa22.03■■□□□ 1.12
HLA-C-208ENST00000487245 IL1F10Q8WWZ1 152 aa22.03■■□□□ 1.12
HLA-C-208ENST00000487245 ISOC2Q96AB3 205 aa22.03■■□□□ 1.12
HLA-C-208ENST00000487245 LIN7CQ9NUP9 197 aaKnown RBP22.03■■□□□ 1.12
HLA-C-208ENST00000487245 MUC3AQ02505 3323 aa22.02■■□□□ 1.12
HLA-C-208ENST00000487245 A0A087WWC5 75 aa22.02■■□□□ 1.12
HLA-C-208ENST00000487245 CEACAM4O75871 244 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms