RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TEX38Q6PEX7 206 aa19.29■□□□□ 0.68
LIME1-206ENST00000487026 OR52L2PQ8NGH6 319 aa19.29■□□□□ 0.68
LIME1-206ENST00000487026 FBLIM1Q8WUP2 373 aa19.29■□□□□ 0.68
LIME1-206ENST00000487026 RAX2Q96IS3 184 aa19.29■□□□□ 0.68
LIME1-206ENST00000487026 P2RX4Q99571 388 aa19.29■□□□□ 0.68
LIME1-206ENST00000487026 HSPB9Q9BQS6 159 aa19.29■□□□□ 0.68
LIME1-206ENST00000487026 RAB9BQ9NP90 201 aa19.29■□□□□ 0.68
LIME1-206ENST00000487026 OR2S2Q9NQN1 319 aa19.29■□□□□ 0.68
LIME1-206ENST00000487026 FAM90A10PA6NDY2 464 aa19.28■□□□□ 0.68
LIME1-206ENST00000487026 FAM90A7PA6NKC0 464 aa19.28■□□□□ 0.68
LIME1-206ENST00000487026 FAM90A23PA8MXZ1 464 aa19.28■□□□□ 0.68
LIME1-206ENST00000487026 CD1AP06126 327 aa19.28■□□□□ 0.68
LIME1-206ENST00000487026 ZNF137PP52743 207 aa19.28■□□□□ 0.68
LIME1-206ENST00000487026 GNMTQ14749 295 aa19.28■□□□□ 0.68
LIME1-206ENST00000487026 DCLRE1BQ9H816 532 aa19.28■□□□□ 0.68
LIME1-206ENST00000487026 GP2P55259 537 aaKnown RBP19.27■□□□□ 0.68
LIME1-206ENST00000487026 RAB25P57735 213 aa19.27■□□□□ 0.68
LIME1-206ENST00000487026 GPR50Q13585 617 aa19.27■□□□□ 0.68
LIME1-206ENST00000487026 MORN2Q502X0 79 aa19.27■□□□□ 0.68
LIME1-206ENST00000487026 FAM27D1Q5T7N8 215 aa19.27■□□□□ 0.68
LIME1-206ENST00000487026 OGFRL1Q5TC84 451 aaPredicted RBP19.27■□□□□ 0.68
LIME1-206ENST00000487026 OR10K2Q6IF99 312 aa19.27■□□□□ 0.68
LIME1-206ENST00000487026 TRAT1Q6PIZ9 186 aa19.27■□□□□ 0.68
LIME1-206ENST00000487026 MRPL30Q8TCC3 161 aaKnown RBP19.27■□□□□ 0.68
LIME1-206ENST00000487026 DPF1Q92782 380 aa19.27■□□□□ 0.68
LIME1-206ENST00000487026 UQCC2Q9BRT2 126 aa19.27■□□□□ 0.68
LIME1-206ENST00000487026 FKBP14Q9NWM8 211 aa19.27■□□□□ 0.68
LIME1-206ENST00000487026 KCNIP1Q9NZI2 227 aa19.27■□□□□ 0.68
LIME1-206ENST00000487026 ERGIC3Q9Y282 383 aa19.27■□□□□ 0.68
LIME1-206ENST00000487026 TXNL1O43396 289 aa19.26■□□□□ 0.67
LIME1-206ENST00000487026 PDCD6O75340 191 aa19.26■□□□□ 0.67
LIME1-206ENST00000487026 CA11O75493 328 aa19.26■□□□□ 0.67
LIME1-206ENST00000487026 GLAP06280 429 aa19.26■□□□□ 0.67
LIME1-206ENST00000487026 SLC6A1P30531 599 aa19.26■□□□□ 0.67
LIME1-206ENST00000487026 PPP1CCP36873 323 aaKnown RBP19.26■□□□□ 0.67
LIME1-206ENST00000487026 DEFB136Q30KP8 78 aa19.26■□□□□ 0.67
LIME1-206ENST00000487026 TMEM30BQ3MIR4 351 aa19.26■□□□□ 0.67
LIME1-206ENST00000487026 ACSM3Q53FZ2 586 aa19.26■□□□□ 0.67
LIME1-206ENST00000487026 NKAPLQ5M9Q1 402 aa19.26■□□□□ 0.67
LIME1-206ENST00000487026 FAM71E2Q8N5Q1 922 aa19.26■□□□□ 0.67
LIME1-206ENST00000487026 NKAIN3Q8N8D7 197 aa19.26■□□□□ 0.67
LIME1-206ENST00000487026 GPR61Q9BZJ8 451 aa19.26■□□□□ 0.67
LIME1-206ENST00000487026 MBNL3Q9NUK0 354 aaKnown RBP19.26■□□□□ 0.67
LIME1-206ENST00000487026 COL7A1Q02388 2944 aa19.26■□□□□ 0.67
LIME1-206ENST00000487026 DNAH9Q9NYC9 4486 aa19.25■□□□□ 0.67
LIME1-206ENST00000487026 CCL24O00175 119 aa19.25■□□□□ 0.67
LIME1-206ENST00000487026 MAPK3P27361 379 aaPredicted RBP19.25■□□□□ 0.67
LIME1-206ENST00000487026 SOX6P35712 828 aa19.25■□□□□ 0.67
LIME1-206ENST00000487026 UNQ9370/PRO34162Q6UXP9 181 aa19.25■□□□□ 0.67
LIME1-206ENST00000487026 OR8H1Q8NGG4 311 aa19.25■□□□□ 0.67
LIME1-206ENST00000487026 RITA1Q96K30 269 aa19.25■□□□□ 0.67
LIME1-206ENST00000487026 MCRIP2Q9BUT9 160 aaKnown RBP19.25■□□□□ 0.67
LIME1-206ENST00000487026 GON7Q9BXV9 100 aa19.25■□□□□ 0.67
LIME1-206ENST00000487026 LANCL1O43813 399 aa19.24■□□□□ 0.67
LIME1-206ENST00000487026 SLC2A2P11168 524 aaPredicted RBP19.24■□□□□ 0.67
LIME1-206ENST00000487026 LSAMPQ13449 338 aa19.24■□□□□ 0.67
LIME1-206ENST00000487026 CXorf66Q5JRM2 361 aaPredicted RBP19.24■□□□□ 0.67
LIME1-206ENST00000487026 STEAP3Q658P3 488 aa19.24■□□□□ 0.67
LIME1-206ENST00000487026 SULT4A1Q9BR01 284 aa19.24■□□□□ 0.67
LIME1-206ENST00000487026 TMED9Q9BVK6 235 aa19.24■□□□□ 0.67
LIME1-206ENST00000487026 CST11Q9H112 138 aa19.24■□□□□ 0.67
LIME1-206ENST00000487026 PTGES3LE9PB15 166 aa19.23■□□□□ 0.67
LIME1-206ENST00000487026 H0YHG0 523 aa19.23■□□□□ 0.67
LIME1-206ENST00000487026 CASQ2O14958 399 aaPredicted RBP19.23■□□□□ 0.67
LIME1-206ENST00000487026 MYF6P23409 242 aa19.23■□□□□ 0.67
LIME1-206ENST00000487026 FOXE3Q13461 319 aa19.23■□□□□ 0.67
LIME1-206ENST00000487026 C11orf87Q6NUJ2 197 aa19.23■□□□□ 0.67
LIME1-206ENST00000487026 LRRTM1Q86UE6 522 aa19.23■□□□□ 0.67
LIME1-206ENST00000487026 ODF3L1Q8IXM7 274 aa19.23■□□□□ 0.67
LIME1-206ENST00000487026 THRSPQ92748 146 aa19.23■□□□□ 0.67
LIME1-206ENST00000487026 FAAP24Q9BTP7 215 aa19.23■□□□□ 0.67
LIME1-206ENST00000487026 ABHD14AQ9BUJ0 271 aa19.23■□□□□ 0.67
LIME1-206ENST00000487026 KCNK15Q9H427 330 aa19.23■□□□□ 0.67
LIME1-206ENST00000487026 GHRLQ9UBU3 117 aa19.23■□□□□ 0.67
LIME1-206ENST00000487026 ANKRD65E5RJM6 399 aa19.22■□□□□ 0.67
LIME1-206ENST00000487026 RRP9O43818 475 aaKnown RBP19.22■□□□□ 0.67
LIME1-206ENST00000487026 CDK1P06493 297 aa19.22■□□□□ 0.67
LIME1-206ENST00000487026 VSIG8P0DPA2 414 aa19.22■□□□□ 0.67
LIME1-206ENST00000487026 CNTFRP26992 372 aa19.22■□□□□ 0.67
LIME1-206ENST00000487026 OR3A3P47888 321 aa19.22■□□□□ 0.67
LIME1-206ENST00000487026 CFHR3Q02985 330 aa19.22■□□□□ 0.67
LIME1-206ENST00000487026 NEDD4LQ96PU5 975 aa19.22■□□□□ 0.67
LIME1-206ENST00000487026 MRPL20Q9BYC9 149 aaKnown RBP19.22■□□□□ 0.67
LIME1-206ENST00000487026 ELANEP08246 267 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 VDAC1P21796 283 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 CHATP28329 748 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 HTR2CP28335 458 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 CDX1P47902 265 aaPredicted RBP19.21■□□□□ 0.67
LIME1-206ENST00000487026 HTD2P86397 168 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 KIR2DS1Q14954 304 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 MMDQ15546 238 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 RBM48Q5RL73 367 aaKnown RBP19.21■□□□□ 0.67
LIME1-206ENST00000487026 VAX1Q5SQQ9 334 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 C6orf141Q5SZD1 244 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 C6orf201Q7Z4U5 140 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 MS4A15Q8N5U1 240 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 RNF152Q8N8N0 203 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 KCTD7Q96MP8 289 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 MND1Q9BWT6 205 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 ZNF107Q9UII5 783 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms