RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 JPT1Q9UK76 154 aa12.74□□□□□ -0.37
HDAC8-218ENST00000486704 MOB4Q9Y3A3 225 aa12.74□□□□□ -0.37
HDAC8-218ENST00000486704 LRRC42Q9Y546 428 aa12.74□□□□□ -0.37
HDAC8-218ENST00000486704 MEGF8Q7Z7M0 2845 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 FOXI3A8MTJ6 420 aaPredicted RBP12.73□□□□□ -0.37
HDAC8-218ENST00000486704 PDCD5O14737 125 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 LDLRAD4O15165 306 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 TXNL1O43396 289 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 GAPDHP04406 335 aaKnown RBP12.73□□□□□ -0.37
HDAC8-218ENST00000486704 AMY1AP04745 511 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 AMY2AP04746 511 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 MYL9P24844 172 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 BLVRBP30043 206 aaPredicted RBP12.73□□□□□ -0.37
HDAC8-218ENST00000486704 VDAC2P45880 294 aaPredicted RBP12.73□□□□□ -0.37
HDAC8-218ENST00000486704 HTD2P86397 168 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 HMGN3Q15651 99 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 Q6ZS46 218 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 MOB1BQ7L9L4 216 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 IZUMO1Q8IYV9 350 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 PRR18Q8N4B5 295 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 FAM3DQ96BQ1 224 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 FAAP24Q9BTP7 215 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 STEAP1Q9UHE8 339 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 HSF4Q9ULV5 492 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 CMYA5Q8N3K9 4069 aa12.73□□□□□ -0.37
HDAC8-218ENST00000486704 TRBV6-6A0A0A6YYG2 114 aa12.72□□□□□ -0.37
HDAC8-218ENST00000486704 IGHV1-3A0A0C4DH29 117 aa12.72□□□□□ -0.37
HDAC8-218ENST00000486704 SHISA3A0PJX4 238 aa12.72□□□□□ -0.37
HDAC8-218ENST00000486704 TSPAN15O95858 294 aa12.72□□□□□ -0.37
HDAC8-218ENST00000486704 EBI3Q14213 229 aa12.72□□□□□ -0.37
HDAC8-218ENST00000486704 ARSJQ5FYB0 599 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-218ENST00000486704 LY6G6FQ5SQ64 297 aa12.72□□□□□ -0.37
HDAC8-218ENST00000486704 FAM53AQ6NSI3 398 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-218ENST00000486704 ZNF880Q6PDB4 577 aa12.72□□□□□ -0.37
HDAC8-218ENST00000486704 ZNF773Q6PK81 442 aa12.72□□□□□ -0.37
HDAC8-218ENST00000486704 OR51D1Q8NGF3 324 aa12.72□□□□□ -0.37
HDAC8-218ENST00000486704 RTN4IP1Q8WWV3 396 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-218ENST00000486704 RIMS4Q9H426 269 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-218ENST00000486704 PLEKHJ1Q9NW61 149 aa12.72□□□□□ -0.37
HDAC8-218ENST00000486704 SLC31A2O15432 143 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 SOCS1O15524 211 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 FGF16O43320 207 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 FBXO24O75426 580 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 LPLP06858 475 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 PSMB9P28065 219 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 FGF9P31371 208 aaPredicted RBP12.71□□□□□ -0.37
HDAC8-218ENST00000486704 ZNF134P52741 427 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 CLDN12P56749 244 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 TMEM95Q3KNT9 176 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 KCTD21Q4G0X4 260 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 ABCA11PQ4W5N1 156 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 MORN2Q502X0 79 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 CT45A1Q5HYN5 189 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 OR10V1Q8NGI7 309 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 CT45A3Q8NHU0 189 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 GALMQ96C23 342 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 OR2S2Q9NQN1 319 aa12.71□□□□□ -0.37
HDAC8-218ENST00000486704 IFITM5A6NNB3 132 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 YPEL1O60688 119 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 PEX14O75381 377 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 IGKV1D-33P01593 117 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 IGKV1-33P01594 117 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 CSF1P09603 554 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 TMEM11P17152 192 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 RAB3BP20337 219 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 REG1BP48304 166 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 HES1Q14469 280 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 GNMTQ14749 295 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 C2orf76Q3KRA6 126 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 HES5Q5TA89 166 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 Q6ZPA2 131 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 C5orf56Q8N8D9 126 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 OR56B1Q8NGI3 324 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 YPEL2Q96QA6 119 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 C12orf4Q9NQ89 552 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 ABRACLQ9P1F3 81 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 MGAT4AQ9UM21 535 aa12.7□□□□□ -0.38
HDAC8-218ENST00000486704 TMEM272A0A1B0GTI8 110 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 LANCL1O43813 399 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 RGS11O94810 467 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 CD1BP29016 333 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 TMEM50BP56557 158 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 OR10A3P58181 314 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 C22orf42Q6IC83 251 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 MOB3BQ86TA1 216 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 TGIF2LXQ8IUE1 241 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 Q8N6K4 173 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 OR52L2PQ8NGH6 319 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 ABHD14AQ9BUJ0 271 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 CHMP1AQ9HD42 196 aaPredicted RBP12.69□□□□□ -0.38
HDAC8-218ENST00000486704 AK3Q9UIJ7 227 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 RAB22AQ9UL26 194 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 STUB1Q9UNE7 303 aa12.69□□□□□ -0.38
HDAC8-218ENST00000486704 CD28P10747 220 aa12.68□□□□□ -0.38
HDAC8-218ENST00000486704 RAB6AP20340 208 aa12.68□□□□□ -0.38
HDAC8-218ENST00000486704 PPP1CCP36873 323 aaKnown RBP12.68□□□□□ -0.38
HDAC8-218ENST00000486704 VEGFCP49767 419 aa12.68□□□□□ -0.38
HDAC8-218ENST00000486704 NR2C2APQ86WQ0 139 aa12.68□□□□□ -0.38
HDAC8-218ENST00000486704 NDUFA11Q86Y39 141 aa12.68□□□□□ -0.38
HDAC8-218ENST00000486704 C11orf44Q8N8P7 122 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms