RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 COX5AP20674 150 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 GNG10P50151 68 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 EFNB1P98172 346 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 OR8B3Q8NGG8 313 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 CORO2AQ92828 525 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 MRPL24Q96A35 216 aaKnown RBP9.54□□□□□ -0.88
HDAC6-228ENST00000486227 OR8B2Q96RD0 313 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 VAMP8Q9BV40 100 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 GGACTQ9BVM4 153 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 ZDHHC11Q9H8X9 412 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 ZNF729A6NN14 1252 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-228ENST00000486227 TRDCB7Z8K6 153 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 PPYP01298 95 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 CLEC3BP05452 202 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 CELA3AP09093 270 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 FDX2Q6P4F2 183 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 TRAT1Q6PIZ9 186 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 TOMM20LQ6UXN7 152 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 LYG1Q8N1E2 194 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 CIB3Q96Q77 187 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-228ENST00000486227 OR2D2Q9H210 308 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 HIF1ANQ9NWT6 349 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 SLC2A8Q9NY64 477 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 CACFD1Q9UGQ2 172 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 CACNA1DQ01668 2161 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 ZIC3O60481 467 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 FCGR3BO75015 233 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 MBPP02686 304 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-228ENST00000486227 COX7A1P24310 79 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 PRRX1P54821 245 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 MPV17LQ2QL34 196 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 VMA21Q3ZAQ7 101 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 ZNF260Q3ZCT1 412 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 FAM219AQ8IW50 185 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 ZNF439Q8NDP4 499 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 POM121Q96HA1 1249 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 MS4A10Q96PG2 267 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 CTDSP1Q9GZU7 261 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 THADAQ6YHU6 1953 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 POLEQ07864 2286 aa9.54□□□□□ -0.88
HDAC6-228ENST00000486227 TIPARPQ7Z3E1 657 aaKnown RBP9.53□□□□□ -0.88
HDAC6-228ENST00000486227 MRGPRGQ86SM5 289 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 CACNG5Q9UF02 275 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 GPR132Q9UNW8 380 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 TRAV14DV4A0A0A6YYC5 116 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 A0A0G2JMM0 328 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 A0A1W2PPB8 328 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 A0A1W2PRS3 328 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 KIR3DP1A8MWS1 328 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 FAM87AP0C7U9 286 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 DTYMKP23919 212 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 SUMO1P63165 101 aaKnown RBP9.53□□□□□ -0.88
HDAC6-228ENST00000486227 SCGB2A2Q13296 93 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 RNF151Q2KHN1 245 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 MOGAT3Q86VF5 341 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 KLHDC1Q8N7A1 406 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 Q9N2K0 584 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 OR6C3Q9NZP0 311 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 MDC1Q14676 2089 aaKnown RBP9.53□□□□□ -0.88
HDAC6-228ENST00000486227 RNF222A6NCQ9 220 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 F6UZH7 168 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 TMPRSS2O15393 492 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 HAND1O96004 215 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 ACAA1P09110 424 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-228ENST00000486227 THBS3P49746 956 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 COTL1Q14019 142 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 LIAT1Q6ZQX7 453 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 TBC1D26Q86UD7 250 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 OPN3Q9H1Y3 402 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-228ENST00000486227 CCL28Q9NRJ3 127 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 SLC2A9Q9NRM0 540 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 RNF7Q9UBF6 113 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 FNDC7Q5VTL7 733 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 C1orf174Q8IYL3 243 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 RAB40CQ96S21 281 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 DOK5Q9P104 306 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 TRAPPC1Q9Y5R8 145 aa9.53□□□□□ -0.88
HDAC6-228ENST00000486227 ZNF25P17030 456 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-228ENST00000486227 SUCLG1P53597 346 aaKnown RBP9.52□□□□□ -0.89
HDAC6-228ENST00000486227 RBM11P57052 281 aaKnown RBP9.52□□□□□ -0.89
HDAC6-228ENST00000486227 FOXO1Q12778 655 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 IL24Q13007 206 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 TMEM183BQ1AE95 376 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 GAPTQ8N292 157 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 MAP1LC3B2A6NCE7 125 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 AQP7O14520 342 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 PHYHD1Q5SRE7 291 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 CLEC2AQ6UVW9 174 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 REC114Q7Z4M0 266 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 CMTM2Q8TAZ6 248 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 VPS25Q9BRG1 176 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 MAP1LC3BQ9GZQ8 125 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 AMMECR1Q9Y4X0 333 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-228ENST00000486227 COL6A6A6NMZ7 2263 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 CLN5O75503 358 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 RPS11P62280 158 aaKnown RBP eCLIP9.52□□□□□ -0.89
HDAC6-228ENST00000486227 ZFP36L1Q07352 338 aaKnown RBP9.52□□□□□ -0.89
HDAC6-228ENST00000486227 BSXQ3C1V8 233 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 STUMQ69YW2 141 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 AQP3Q92482 292 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms