RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 PRSS3P35030 304 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 SSTR5P35346 364 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 TGFBR1P36897 503 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 RAB7AP51149 207 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 C17orf58Q2M2W7 97 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 ZNF626Q68DY1 528 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 ZNF880Q6PDB4 577 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 Q6ZS49 121 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 TCF23Q7RTU1 214 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 OR2AK2Q8NG84 335 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 OR5H6Q8NGV6 325 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 OR10J5Q8NHC4 309 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 DYRK2Q92630 601 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 GCDHQ92947 438 aaPredicted RBP6.74□□□□□ -1.33
SF3A1-208ENST00000485618 RPEQ96AT9 228 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 SLC6A7Q99884 636 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 OCSTAMPQ9BR26 566 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 GINS4Q9BRT9 223 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 ST6GALNAC5Q9BVH7 336 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 MMP28Q9H239 520 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 MMP27Q9H306 513 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 AUNIPQ9H7T9 357 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 RAB18Q9NP72 206 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 IFT46Q9NQC8 304 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 BATF3Q9NR55 127 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 GFOD1Q9NXC2 390 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 ZNF581Q9P0T4 197 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 PITPNC1Q9UKF7 332 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 MRPS7Q9Y2R9 242 aaKnown RBP6.74□□□□□ -1.33
SF3A1-208ENST00000485618 POMT1Q9Y6A1 747 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 A3GALT2U3KPV4 340 aa6.74□□□□□ -1.33
SF3A1-208ENST00000485618 DSCAML1Q8TD84 2053 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 TRAV39A0A0B4J263 110 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 A0A1W2PRD5 423 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 A0A1W2PRF3 423 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 A0A1W2PRM7 423 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 TMEM235A6NFC5 223 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 C15orf65H3BRN8 121 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 BUB1B-PAK6H3BSN5 160 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 SULT1C2O00338 296 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 FABP7O15540 132 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 TXNL1O43396 289 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 YPEL1O60688 119 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 GAPDHP04406 335 aaKnown RBP6.73□□□□□ -1.33
SF3A1-208ENST00000485618 FCGR3AP08637 254 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 FAM106CPP0CH98 169 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 CEACAM6P40199 344 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 ARPC4P59998 168 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 HILS1P60008 231 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 RPL15P61313 204 aaKnown RBP6.73□□□□□ -1.33
SF3A1-208ENST00000485618 HLA-DRB3P79483 266 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 MRPS10P82664 201 aaKnown RBP6.73□□□□□ -1.33
SF3A1-208ENST00000485618 KLRD1Q13241 179 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 SPCS2Q15005 226 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 HMGN3Q15651 99 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 DEFB112Q30KQ8 113 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 MOGAT2Q3SYC2 334 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 ZNF260Q3ZCT1 412 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 Q6YL49 198 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 LIAT1Q6ZQX7 453 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 LINC00311Q8N616 119 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 SIGLECL1Q8N7X8 197 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 MCFD2Q8NI22 146 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 DYNC2LI1Q8TCX1 351 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 C22orf15Q8WYQ4 148 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 SLC25A38Q96DW6 304 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 AKR1E2Q96JD6 320 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 YPEL2Q96QA6 119 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 S1PR3Q99500 378 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 C6orf62Q9GZU0 229 aaPredicted RBP6.73□□□□□ -1.33
SF3A1-208ENST00000485618 MEGF9Q9H1U4 602 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 PRDM13Q9H4Q3 707 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 SCPEP1Q9HB40 452 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 PSG11Q9UQ72 335 aa6.73□□□□□ -1.33
SF3A1-208ENST00000485618 RBM7Q9Y580 266 aaKnown RBP6.73□□□□□ -1.33
SF3A1-208ENST00000485618 A0A0U1RQK1 487 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 ODF3BA8MYP8 253 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 ITGB1BP1O14713 200 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 RAB29O14966 203 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 HPGDSO60760 199 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 SLC22A5O76082 557 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 IGLV1-47P01700 117 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 OR3A3P47888 321 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 LOXL3P58215 753 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 TAS2R46P59540 309 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 TAS2R20P59543 309 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 PLA2G7Q13093 441 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 SSX2Q16385 188 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 LRRC75BQ2VPJ9 315 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 HLA-DRB5Q30154 266 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 MORN2Q502X0 79 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 PLA1AQ53H76 456 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 RUSC1-AS1Q66K80 236 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 CNIH2Q6PI25 160 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 LDLRAD3Q86YD5 345 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 OR8H3Q8N146 312 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 PIP4P2Q8N4L2 257 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 OR1L1Q8NH94 360 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 FCAMRQ8WWV6 532 aa6.72□□□□□ -1.33
SF3A1-208ENST00000485618 DIRAS2Q96HU8 199 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms