RNA–Protein interactions for RNA: ENST00000485450.5

USP4-211, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 3,541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-211ENST00000485450 IGKV1D-42A0A075B6H8 117 aa6.58□□□□□ -1.36
USP4-211ENST00000485450 IGHV2OR16-5A0A0B4J2B6 119 aa6.58□□□□□ -1.36
USP4-211ENST00000485450 SERPINE3A8MV23 424 aa6.58□□□□□ -1.36
USP4-211ENST00000485450 MDKP21741 143 aaPredicted RBP6.58□□□□□ -1.36
USP4-211ENST00000485450 IL12BP29460 328 aa6.58□□□□□ -1.36
USP4-211ENST00000485450 GRPRP30550 384 aa6.58□□□□□ -1.36
USP4-211ENST00000485450 RPS4XP62701 263 aaKnown RBP6.58□□□□□ -1.36
USP4-211ENST00000485450 HLA-DRB3P79483 266 aa6.58□□□□□ -1.36
USP4-211ENST00000485450 COL9A2Q14055 689 aaPredicted RBP6.58□□□□□ -1.36
USP4-211ENST00000485450 C3orf36Q3SXR2 165 aa6.58□□□□□ -1.36
USP4-211ENST00000485450 FBLN7Q53RD9 439 aa6.58□□□□□ -1.36
USP4-211ENST00000485450 HLA-DQA1Q5Y7H0 255 aa6.58□□□□□ -1.36
USP4-211ENST00000485450 SAXO1Q8IYX7 474 aa6.58□□□□□ -1.36
USP4-211ENST00000485450 ZNF676Q8N7Q3 588 aa6.58□□□□□ -1.36
USP4-211ENST00000485450 KLHL13Q9P2N7 655 aa6.58□□□□□ -1.36
USP4-211ENST00000485450 B4GALT7Q9UBV7 327 aa6.58□□□□□ -1.36
USP4-211ENST00000485450 ZNF320A2RRD8 509 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 C2orf72A6NCS6 295 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 MAGEA5P43359 124 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 SELENOVP59797 346 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 PMS2P11Q13670 270 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 LINC01590Q5TEZ4 76 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 ASPHD2Q6ICH7 369 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 GVQW1Q8N7I0 195 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 SLC26A10Q8NG04 563 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 OR6K6Q8NGW6 343 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 PSMG3-AS1Q96PY0 264 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 ADOQ96SZ5 270 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 CNTD2Q9H8S5 307 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 KIAA1456Q9P272 454 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 LRP12Q9Y561 859 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 RBM7Q9Y580 266 aaKnown RBP6.57□□□□□ -1.36
USP4-211ENST00000485450 LOC102724200A0A096LPH7 203 aaPredicted RBP6.57□□□□□ -1.36
USP4-211ENST00000485450 A0A1B0GTH9 108 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 OR3A2P47893 321 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 CRYBA4P53673 196 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 TLE1Q04724 770 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 RBPJQ06330 500 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 SP5Q6BEB4 398 aaPredicted RBP6.57□□□□□ -1.36
USP4-211ENST00000485450 UNQ5815/PRO19632Q6UWF5 114 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 SLC16A9Q7RTY1 509 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 MARCH3Q86UD3 253 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 PRR13Q9NZ81 148 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 KLHDC2Q9Y2U9 406 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 IER3IP1Q9Y5U9 82 aa6.57□□□□□ -1.36
USP4-211ENST00000485450 A0A1B0GU03 582 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 TNFSF13O75888 250 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 CELA3AP09093 270 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 OR5G3P0C626 314 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 DNASE1L1P49184 302 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 ARF6P62330 175 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 CCL20P78556 96 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 EGR4Q05215 589 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 SCGB2A2Q13296 93 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 ICAM4Q14773 271 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 C5orf64Q2M2E5 130 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 ELOA3BQ3SY89 546 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 ZNF506Q5JVG8 444 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 SPSB3Q6PJ21 355 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 TEX43Q6ZNM6 134 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 ZNF550Q7Z398 422 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 CYB561D1Q8N8Q1 229 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 ELOA3Q8NG57 546 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 PYGO2Q9BRQ0 406 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 HSPB7Q9UBY9 170 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 WDR45Q9Y484 360 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 IGF2RP11717 2491 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 TRAV26-1A0A087WT03 109 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 SAP30O75446 220 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 NDUFB2O95178 105 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 CEACAM3P40198 252 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 PNRC1Q12796 327 aaPredicted RBP6.56□□□□□ -1.36
USP4-211ENST00000485450 HIST3H3Q16695 136 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 PCK2Q16822 640 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 TMEM176BQ3YBM2 270 aaPredicted RBP6.56□□□□□ -1.36
USP4-211ENST00000485450 FOXL2NBQ6ZUU3 175 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 OR10G4Q8NGN3 311 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 FAM213BQ8TBF2 198 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 ZNF596Q8TC21 504 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 IGFBPL1Q8WX77 278 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 CACNG8Q8WXS5 425 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 SMIM12Q96EX1 92 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 NMNAT3Q96T66 252 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 SH3BGRL3Q9H299 93 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 PSG11Q9UQ72 335 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 APC2O95996 2303 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 TRGV5A0A0B4J1U4 118 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 PRDX4Q13162 271 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 GLYATL3Q5SZD4 288 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 WBP2NLQ6ICG8 309 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 COLCA1Q6ZS62 124 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 OR4S2Q8NH73 311 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 ITLN2Q8WWU7 325 aaPredicted RBP6.56□□□□□ -1.36
USP4-211ENST00000485450 GPX7Q96SL4 187 aaPredicted RBP6.56□□□□□ -1.36
USP4-211ENST00000485450 CABLES2Q9BTV7 478 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 IKZF2Q9UKS7 526 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 WSB1Q9Y6I7 421 aa6.56□□□□□ -1.36
USP4-211ENST00000485450 HSPB2A8KAH6 182 aa6.55□□□□□ -1.36
USP4-211ENST00000485450 TMEM225BP0DP42 221 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms