RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	FAM90A10P	A6NDY2	464 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	FAM90A7P	A6NKC0	464 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	FAM90A23P	A8MXZ1	464 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	C12orf77	C9JDV5	145 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	CCL24	O00175	119 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	CA11	O75493	328 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	HBZ	P02008	142 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	MGMT	P16455	207 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	CEL	P19835	753 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	FUT3	P21217	361 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	SOX6	P35712	828 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	DGCR2	P98153	550 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	SLC25A48	Q6ZT89	311 aa	Known RBP	10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	C18orf65	Q6ZTR6	163 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	CDH26	Q8IXH8	852 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	PACRGL	Q8N7B6	248 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	OR5M8	Q8NGP6	311 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	OR8U1	Q8NH10	309 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	TFAP2C	Q92754	450 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	GGH	Q92820	318 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	PGLYRP3	Q96LB9	341 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	WWC2-AS2	Q96NR7	200 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	DUX3	Q96PT4	197 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	S1PR3	Q99500	378 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	B9D2	Q9BPU9	175 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	CST11	Q9H112	138 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	OR2S2	Q9NQN1	319 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	DNAH7	Q8WXX0	4024 aa		10.43	□□□□□ -0.74
UBA3-210	ENST00000485424	LINC01548	A6NM66	108 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	SLC31A2	O15432	143 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	RGS11	O94810	467 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	RPLP1	P05386	114 aa	Known RBP	10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	ELANE	P08246	267 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	OR5H8	P0DN80	308 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	MYF6	P23409	242 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	WNT4	P56705	351 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	FOXE3	Q13461	319 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	MMD	Q15546	238 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	LCNL1	Q6ZST4	164 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	AHSA2	Q719I0	299 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424		Q8N6K4	173 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	OR1L1	Q8NH94	360 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	DCLRE1B	Q9H816	532 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	TAF9B	Q9HBM6	251 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	CNOT2	Q9NZN8	540 aa	Known RBP	10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	RCC2	Q9P258	522 aa	Known RBP	10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	ERGIC3	Q9Y282	383 aa		10.42	□□□□□ -0.74
UBA3-210	ENST00000485424	TRBV5-7	A0A0A0MS05	114 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	RAMP3	O60896	148 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	GLA	P06280	429 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	SLC2A2	P11168	524 aa	Predicted RBP	10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	RPS11	P62280	158 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	NKAPL	Q5M9Q1	402 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	C9orf66	Q5T8R8	295 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	STEAP3	Q658P3	488 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	TMEM65	Q6PI78	240 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	TMEM104	Q8NE00	496 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	ST6GALNAC6	Q969X2	333 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	FAM46B	Q96A09	425 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	NEDD4L	Q96PU5	975 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	DERL3	Q96Q80	235 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	P2RX4	Q99571	388 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	ZNF251	Q9BRH9	671 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	UQCC2	Q9BRT2	126 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	ABHD14A	Q9BUJ0	271 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	VCX	Q9H320	206 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	ABRACL	Q9P1F3	81 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	GHRL	Q9UBU3	117 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	ZNF107	Q9UII5	783 aa	Predicted RBP	10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	JPT1	Q9UK76	154 aa		10.41	□□□□□ -0.74
UBA3-210	ENST00000485424	ZNF736	B4DX44	427 aa	Predicted RBP	10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	LANCL1	O43813	399 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	PDCD6	O75340	191 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	RCC1	P18754	421 aa	Predicted RBP	10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	CDX1	P47902	265 aa	Predicted RBP	10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	ZNF137P	P52743	207 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	F2RL1	P55085	397 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	ADARB1	P78563	741 aa	Known RBP	10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	LSAMP	Q13449	338 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	DEFB136	Q30KP8	78 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	MORN2	Q502X0	79 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	CT45A1	Q5HYN5	189 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	GLT8D1	Q68CQ7	371 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	ZNF439	Q8NDP4	499 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	BPIFB6	Q8NFQ5	453 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	CT45A3	Q8NHU0	189 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	GALM	Q96C23	342 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	RAX2	Q96IS3	184 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424		Q96M66	194 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	HSPB9	Q9BQS6	159 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	KIAA1456	Q9P272	454 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424	LRRC42	Q9Y546	428 aa		10.4	□□□□□ -0.74
UBA3-210	ENST00000485424		H0YHG0	523 aa		10.39	□□□□□ -0.75
UBA3-210	ENST00000485424	SC5D	O75845	299 aa		10.39	□□□□□ -0.75
UBA3-210	ENST00000485424	CD1A	P06126	327 aa		10.39	□□□□□ -0.75
UBA3-210	ENST00000485424	UBB	P0CG47	229 aa		10.39	□□□□□ -0.75
UBA3-210	ENST00000485424	VHL	P40337	213 aa		10.39	□□□□□ -0.75
UBA3-210	ENST00000485424	ZNF134	P52741	427 aa		10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms