RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 C15orf65H3BRN8 121 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 SDCBPO00560 298 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-206ENST00000483030 SLC16A6O15403 523 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 GYG2O15488 501 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 OR5H8P0DN80 308 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 MYF6P23409 242 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 IL3RAP26951 378 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 PPIFP30405 207 aaKnown RBP5.72□□□□□ -1.49
CSDE1-206ENST00000483030 VHLP40337 213 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 RAB9AP51151 201 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 POLR2GP62487 172 aaKnown RBP eCLIP5.72□□□□□ -1.49
CSDE1-206ENST00000483030 RUNX1Q01196 453 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 PAX5Q02548 391 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 ALKBH1Q13686 389 aaKnown RBP5.72□□□□□ -1.49
CSDE1-206ENST00000483030 RSU1Q15404 277 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 IGSF11Q5DX21 431 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 RAB12Q6IQ22 244 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 ZDHHC13Q8IUH4 622 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 SERPINA12Q8IW75 414 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 PARP16Q8N5Y8 322 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 SUMF2Q8NBJ7 301 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 OR52M1Q8NGK5 317 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 OR8J1Q8NGP2 316 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 TNFAIP8L1Q8WVP5 186 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 DLX4Q92988 240 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-206ENST00000483030 PELI1Q96FA3 418 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 GPER1Q99527 375 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 TSC22D3Q99576 134 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 CIB1Q99828 191 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 FAM192AQ9GZU8 254 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 ALX4Q9H161 411 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-206ENST00000483030 RIBC2Q9H4K1 309 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 GFOD1Q9NXC2 390 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 ENOPH1Q9UHY7 261 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 ZNF580Q9UK33 172 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 POMPQ9Y244 141 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 CBY1Q9Y3M2 126 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 SACSQ9NZJ4 4579 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 BIRC6Q9NR09 4857 aa5.72□□□□□ -1.49
CSDE1-206ENST00000483030 TMEM30CPA0ZSE6 113 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 MAGEA13PA6NCF6 341 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 FAM90A10PA6NDY2 464 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 J3QRE1 110 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 GABRPO00591 440 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 SLC31A2O15432 143 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 MAGEB3O15480 346 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 OR7C1O76099 320 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-206ENST00000483030 CDRT1O95170 752 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 IGLV1-40P01703 118 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 ZNF134P52741 427 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 SLURP1P55000 103 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 ATP6AP1Q15904 470 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 ZNF124Q15973 351 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 SRSF7Q16629 238 aaKnown RBP eCLIP5.71□□□□□ -1.5
CSDE1-206ENST00000483030 CT45A1Q5HYN5 189 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 ASCL4Q6XD76 172 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 SLC25A48Q6ZT89 311 aaKnown RBP5.71□□□□□ -1.5
CSDE1-206ENST00000483030 AMIGO2Q86SJ2 522 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 SLC51BQ86UW2 128 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 ACBD7Q8N6N7 88 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 C8orf31Q8N9H6 132 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 CCDC197Q8NCU1 140 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 OR51A2Q8NGJ7 313 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 CT45A3Q8NHU0 189 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 ARPC1AQ92747 370 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 ISOC1Q96CN7 298 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 RITA1Q96K30 269 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 C4orf36Q96KX1 117 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 CMTM3Q96MX0 182 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 TM2D3Q9BRN9 247 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 CHCHD6Q9BRQ6 235 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 WDR12Q9GZL7 423 aaKnown RBP5.71□□□□□ -1.5
CSDE1-206ENST00000483030 OR51J1Q9H342 316 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 EDA2RQ9HAV5 297 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 PARP11Q9NR21 331 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 ING4Q9UNL4 249 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 ST3GAL6Q9Y274 331 aa5.71□□□□□ -1.5
CSDE1-206ENST00000483030 TRAV41A0A0B4J266 112 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 LINC01619G3V211 115 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 GEMIN2O14893 280 aaKnown RBP5.7□□□□□ -1.5
CSDE1-206ENST00000483030 LDLRAD4O15165 306 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 ATP6V0E1O15342 81 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 TXNL1O43396 289 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 ORC5O43913 435 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 MT-ND4P03905 459 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 IGHV4-30-4P0DP06 118 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 RAB3AP20336 220 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 LORP23490 312 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-206ENST00000483030 FASP25445 335 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 CNTFRP26992 372 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 HSPA13P48723 471 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 ZNF137PP52743 207 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 S100A12P80511 92 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 MMDQ15546 238 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 DNAL1Q4LDG9 190 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 ATAD3CQ5T2N8 411 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 SIGIRRQ6IA17 410 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 ACSM6Q6P461 480 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 LHFPL3Q86UP9 236 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 Q8N1Y9 231 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms