RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 HERPUD1Q15011 391 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 BAK1Q16611 211 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 TMEM30BQ3MIR4 351 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 STEAP3Q658P3 488 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 FAM53AQ6NSI3 398 aaPredicted RBP10.01□□□□□ -0.81
SDC1-206ENST00000482879 TMEM229BQ8NBD8 167 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 OR5AP2Q8NGF4 316 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 OR10V1Q8NGI7 309 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 OR5H2Q8NGV7 314 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 TNFRSF14Q92956 283 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 LEAP2Q969E1 77 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 TSC22D3Q99576 134 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 GINS4Q9BRT9 223 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 CABLES2Q9BTV7 478 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 TMEM133Q9H2Q1 129 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 UNKLQ9H9P5 680 aaKnown RBP10.01□□□□□ -0.81
SDC1-206ENST00000482879 NECAP2Q9NVZ3 263 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 TAS2R8Q9NYW2 309 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 OR1A1Q9P1Q5 309 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 SLC23A1Q9UHI7 598 aa10.01□□□□□ -0.81
SDC1-206ENST00000482879 MAST4O15021 2626 aa10□□□□□ -0.81
SDC1-206ENST00000482879 TRBV6-7A0A0A0MS04 114 aa10□□□□□ -0.81
SDC1-206ENST00000482879 J3QRK9 145 aa10□□□□□ -0.81
SDC1-206ENST00000482879 DIRAS3O95661 229 aa10□□□□□ -0.81
SDC1-206ENST00000482879 IGHV3-7P01780 117 aa10□□□□□ -0.81
SDC1-206ENST00000482879 CSF1P09603 554 aa10□□□□□ -0.81
SDC1-206ENST00000482879 HOXB4P17483 251 aaPredicted RBP10□□□□□ -0.81
SDC1-206ENST00000482879 ZBTB25P24278 435 aa10□□□□□ -0.81
SDC1-206ENST00000482879 COX7A1P24310 79 aa10□□□□□ -0.81
SDC1-206ENST00000482879 CD40LGP29965 261 aa10□□□□□ -0.81
SDC1-206ENST00000482879 HRH1P35367 487 aa10□□□□□ -0.81
SDC1-206ENST00000482879 PPP1CCP36873 323 aaKnown RBP10□□□□□ -0.81
SDC1-206ENST00000482879 CEACAM6P40199 344 aa10□□□□□ -0.81
SDC1-206ENST00000482879 RFX2P48378 723 aa10□□□□□ -0.81
SDC1-206ENST00000482879 INPP1P49441 399 aa10□□□□□ -0.81
SDC1-206ENST00000482879 TAS2R19P59542 299 aa10□□□□□ -0.81
SDC1-206ENST00000482879 KLRD1Q13241 179 aa10□□□□□ -0.81
SDC1-206ENST00000482879 GNMTQ14749 295 aa10□□□□□ -0.81
SDC1-206ENST00000482879 CDK10Q15131 360 aa10□□□□□ -0.81
SDC1-206ENST00000482879 MORN2Q502X0 79 aa10□□□□□ -0.81
SDC1-206ENST00000482879 UTF1Q5T230 341 aa10□□□□□ -0.81
SDC1-206ENST00000482879 TRIQKQ629K1 86 aa10□□□□□ -0.81
SDC1-206ENST00000482879 NCR3LG1Q68D85 454 aa10□□□□□ -0.81
SDC1-206ENST00000482879 CLEC9AQ6UXN8 241 aa10□□□□□ -0.81
SDC1-206ENST00000482879 PDZD9Q8IXQ8 264 aa10□□□□□ -0.81
SDC1-206ENST00000482879 ABHD12Q8N2K0 398 aa10□□□□□ -0.81
SDC1-206ENST00000482879 PNKDQ8N490 385 aa10□□□□□ -0.81
SDC1-206ENST00000482879 OR13D1Q8NGV5 346 aa10□□□□□ -0.81
SDC1-206ENST00000482879 OR10J5Q8NHC4 309 aa10□□□□□ -0.81
SDC1-206ENST00000482879 LHX4Q969G2 390 aa10□□□□□ -0.81
SDC1-206ENST00000482879 TRIM63Q969Q1 353 aa10□□□□□ -0.81
SDC1-206ENST00000482879 UPRTQ96BW1 309 aa10□□□□□ -0.81
SDC1-206ENST00000482879 ZNF107Q9UII5 783 aaPredicted RBP10□□□□□ -0.81
SDC1-206ENST00000482879 JPT1Q9UK76 154 aa10□□□□□ -0.81
SDC1-206ENST00000482879 HIVEP2P31629 2446 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 CELSR1Q9NYQ6 3014 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 A0A087X0M5 115 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 IGHV2-26A0A0B4J1V2 119 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 A0A1B0GX30 115 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 ANKRD20A5PA0PJZ0 165 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 A8MV72 311 aaPredicted RBP9.99□□□□□ -0.81
SDC1-206ENST00000482879 RNASEK-C17orf49H0YIS7 233 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 M0QYG6 137 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 YPEL1O60688 119 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 RGS11O94810 467 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 CD3DP04234 171 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 OR5H8P0DN80 308 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 CD34P28906 385 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 ACTBL2Q562R1 376 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 ZNF57Q68EA5 555 aaPredicted RBP9.99□□□□□ -0.81
SDC1-206ENST00000482879 HCP5Q6MZN7 132 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 STEAP1BQ6NZ63 245 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 C1orf229Q6ZS94 237 aaPredicted RBP9.99□□□□□ -0.81
SDC1-206ENST00000482879 TOMM5Q8N4H5 51 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 YPEL2Q96QA6 119 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 CCDC32Q9BV29 185 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 CLEC7AQ9BXN2 247 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 EHFQ9NZC4 300 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 ZNF69Q9UC07 566 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 PSG11Q9UQ72 335 aa9.99□□□□□ -0.81
SDC1-206ENST00000482879 IGHV3OR16-10A0A075B7F0 116 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 CENPVL3A0A0U1RRI6 287 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 A0A1W2PPE3 182 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 A0A1W2PRD5 423 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 A0A1W2PRF3 423 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 A0A1W2PRM7 423 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 TOR1AO14656 332 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 RAB3DO95716 219 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 CD74P04233 296 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 AKAIN1P0CW23 69 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 IL7P13232 177 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 TBPP20226 339 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 NFYAP23511 347 aaPredicted RBP9.98□□□□□ -0.81
SDC1-206ENST00000482879 GNG10P50151 68 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 UBE2E1P51965 193 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 PRRX1P54821 245 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 AP3S2P59780 193 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 DYRK1AQ13627 763 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 Q3ZCU0 254 aa9.98□□□□□ -0.81
SDC1-206ENST00000482879 RNASE10Q5GAN6 216 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms