RNA–Protein interactions for RNA: ENST00000482014.1

CHRD-213, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-213ENST00000482014 GHRLQ9UBU3 117 aa12.51□□□□□ -0.41
CHRD-213ENST00000482014 TRAPPC2LQ9UL33 140 aa12.51□□□□□ -0.41
CHRD-213ENST00000482014 HYDINQ4G0P3 5121 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 IGHV3-43A0A0B4J1X8 118 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 IGHV1-3A0A0C4DH29 117 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 RBMY1BA6NDE4 496 aaKnown RBP12.5□□□□□ -0.41
CHRD-213ENST00000482014 RBMY1EA6NEQ0 496 aaKnown RBP12.5□□□□□ -0.41
CHRD-213ENST00000482014 CCRL2O00421 344 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 FGF16O43320 207 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 CA11O75493 328 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 CRTAPO75718 401 aaPredicted RBP12.5□□□□□ -0.41
CHRD-213ENST00000482014 RBMY1DP0C7P1 496 aaKnown RBP12.5□□□□□ -0.41
CHRD-213ENST00000482014 IGHV3-43DP0DP04 118 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 CD37P11049 281 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 TMEM11P17152 192 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 FUT3P21217 361 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 VHLP40337 213 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 AQP4P55087 323 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 HES1Q14469 280 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 SPHARQ15513 63 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 FAM27D1Q5T7N8 215 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 C10orf99Q6UWK7 81 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 LRRTM1Q86UE6 522 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 C5orf56Q8N8D9 126 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 ZNF439Q8NDP4 499 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 CYYR1Q96J86 154 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 SCN3BQ9NY72 215 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 SMAD5-AS1Q9Y6J3 95 aa12.5□□□□□ -0.41
CHRD-213ENST00000482014 SPINT2O43291 252 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 IGKV1D-33P01593 117 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 IGKV1-33P01594 117 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 HBZP02008 142 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 REG1BP48304 166 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 GPR50Q13585 617 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 HNF4GQ14541 408 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 TMEM30BQ3MIR4 351 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 C9orf152Q5JTZ5 239 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 C1orf100Q5SVJ3 147 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 SLC25A48Q6ZT89 311 aaKnown RBP12.49□□□□□ -0.41
CHRD-213ENST00000482014 MOB3BQ86TA1 216 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 PHYHIPQ92561 330 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 TMED9Q9BVK6 235 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 RAB9BQ9NP90 201 aa12.49□□□□□ -0.41
CHRD-213ENST00000482014 MBNL3Q9NUK0 354 aaKnown RBP12.49□□□□□ -0.41
CHRD-213ENST00000482014 UBE2QL1A1L167 161 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 SLC31A2O15432 143 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 PDCD6O75340 191 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 UBBP0CG47 229 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 RCC1P18754 421 aaPredicted RBP12.48□□□□□ -0.41
CHRD-213ENST00000482014 ECI1P42126 302 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 ZNF134P52741 427 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 ZNF137PP52743 207 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 CT45A1Q5HYN5 189 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 C9orf66Q5T8R8 295 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 TRAT1Q6PIZ9 186 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 SBSPONQ8IVN8 264 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 IZUMO1Q8IYV9 350 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 Q8N6K4 173 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 OR1L1Q8NH94 360 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 CT45A3Q8NHU0 189 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 RTN4IP1Q8WWV3 396 aaPredicted RBP12.48□□□□□ -0.41
CHRD-213ENST00000482014 FAM46BQ96A09 425 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 ISOC1Q96CN7 298 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 EAF1Q96JC9 268 aaPredicted RBP12.48□□□□□ -0.41
CHRD-213ENST00000482014 P2RX4Q99571 388 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 CST11Q9H112 138 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 DUSP21Q9H596 190 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 CSMD3Q7Z407 3707 aa12.48□□□□□ -0.41
CHRD-213ENST00000482014 IGHV3-72A0A0B4J1Y9 119 aa12.47□□□□□ -0.41
CHRD-213ENST00000482014 UCHL1P09936 223 aa12.47□□□□□ -0.41
CHRD-213ENST00000482014 SRMP19623 302 aa12.47□□□□□ -0.41
CHRD-213ENST00000482014 MYF6P23409 242 aa12.47□□□□□ -0.41
CHRD-213ENST00000482014 IL3RAP26951 378 aa12.47□□□□□ -0.41
CHRD-213ENST00000482014 CD1BP29016 333 aa12.47□□□□□ -0.41
CHRD-213ENST00000482014 MED22Q15528 200 aa12.47□□□□□ -0.41
CHRD-213ENST00000482014 GLT8D1Q68CQ7 371 aa12.47□□□□□ -0.41
CHRD-213ENST00000482014 CEACAM19Q7Z692 300 aa12.47□□□□□ -0.41
CHRD-213ENST00000482014 ZNF554Q86TJ5 538 aa12.47□□□□□ -0.41
CHRD-213ENST00000482014 TPRKBQ9Y3C4 175 aa12.47□□□□□ -0.41
CHRD-213ENST00000482014 PSMB11A5LHX3 300 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 SLC22A1O15245 554 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 IGHG2P01859 326 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 RPL23AP62750 156 aaKnown RBP12.46□□□□□ -0.41
CHRD-213ENST00000482014 TPBGQ13641 420 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 HSD17B12Q53GQ0 312 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 RBM48Q5RL73 367 aaKnown RBP12.46□□□□□ -0.41
CHRD-213ENST00000482014 STEAP3Q658P3 488 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 OR10K2Q6IF99 312 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 PRR18Q8N4B5 295 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 OR10V1Q8NGI7 309 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 OR2T10Q8NGZ9 312 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 MRPL30Q8TCC3 161 aaKnown RBP12.46□□□□□ -0.41
CHRD-213ENST00000482014 CHPT1Q8WUD6 406 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 ANKRD60Q9BZ19 345 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 TAF9BQ9HBM6 251 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 ISYNA1Q9NPH2 558 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 PLSCR3Q9NRY6 295 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 ZFP57Q9NU63 452 aa12.46□□□□□ -0.41
CHRD-213ENST00000482014 GNG12Q9UBI6 72 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms