RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 ZNF69Q9UC07 566 aa8.39□□□□□ -1.07
USP39-215ENST00000481409 GAB2Q9UQC2 676 aa8.39□□□□□ -1.07
USP39-215ENST00000481409 DOCK11Q5JSL3 2073 aa8.39□□□□□ -1.07
USP39-215ENST00000481409 TENM4Q6N022 2769 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 IGKV1-6A0A0C4DH72 117 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 FAM172BPA6NC97 362 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 SDCBPO00560 298 aaPredicted RBP8.38□□□□□ -1.07
USP39-215ENST00000481409 FCN3O75636 299 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 B3GALNT1O75752 331 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 USF1P22415 310 aaPredicted RBP8.38□□□□□ -1.07
USP39-215ENST00000481409 GATA3P23771 443 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 SSTR5P35346 364 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 CEACAM6P40199 344 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 LUMP51884 338 aaPredicted RBP8.38□□□□□ -1.07
USP39-215ENST00000481409 LOXL1Q08397 574 aaPredicted RBP8.38□□□□□ -1.07
USP39-215ENST00000481409 AADACL3Q5VUY0 350 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 TCF23Q7RTU1 214 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 OR13C8Q8NGS7 320 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 OR1L1Q8NH94 360 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 IL1F10Q8WWZ1 152 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 NRGNQ92686 78 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 C20orf85Q9H1P6 137 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 UNKLQ9H9P5 680 aaKnown RBP8.38□□□□□ -1.07
USP39-215ENST00000481409 GFOD1Q9NXC2 390 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 GPR132Q9UNW8 380 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 KPTNQ9Y664 436 aa8.38□□□□□ -1.07
USP39-215ENST00000481409 IGHV4-30-2A0A087WSY4 118 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 INMT-MINDY4F8WBC2 141 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 PEX14O75381 377 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 IL5P05113 134 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 CTSDP07339 412 aaPredicted RBP8.37□□□□□ -1.07
USP39-215ENST00000481409 H2AFB2P0C5Z0 115 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 CD34P28906 385 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 RBMXP38159 391 aaKnown RBP8.37□□□□□ -1.07
USP39-215ENST00000481409 CCR6P51684 374 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 DLX6P56179 175 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 LOXL3P58215 753 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 ERVFRD-1P60508 538 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 RND3P61587 244 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 ZNF273Q14593 569 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 MORN2Q502X0 79 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 FAAP20Q6NZ36 180 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 BTNL3Q6UXE8 466 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 Q6ZNX1 250 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 CMTM1Q8IZ96 169 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 PRR18Q8N4B5 295 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 LINC00311Q8N616 119 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 CCDC71LQ8N9Z2 235 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.37□□□□□ -1.07
USP39-215ENST00000481409 OR10V1Q8NGI7 309 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 ZNF596Q8TC21 504 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 CYYR1Q96J86 154 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 RSRP1Q9BUV0 290 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 METTL8Q9H825 291 aaKnown RBP8.37□□□□□ -1.07
USP39-215ENST00000481409 GPN1Q9HCN4 374 aaPredicted RBP8.37□□□□□ -1.07
USP39-215ENST00000481409 NUDT15Q9NV35 164 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 RDH8Q9NYR8 311 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 GNG12Q9UBI6 72 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 C14orf166Q9Y224 244 aaKnown RBP8.37□□□□□ -1.07
USP39-215ENST00000481409 SESN1Q9Y6P5 492 aa8.37□□□□□ -1.07
USP39-215ENST00000481409 IGHV2-70DA0A0C4DH43 119 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 OR5H14A6NHG9 310 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 KIAA1324LA8MWY0 1029 aaPredicted RBP8.36□□□□□ -1.07
USP39-215ENST00000481409 B4DSR2 109 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 GPR31O00270 319 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 IGHV1-8P0DP01 117 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 PGAM2P15259 253 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 AADACP22760 399 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 NFYAP23511 347 aaPredicted RBP8.36□□□□□ -1.07
USP39-215ENST00000481409 TMEM128Q5BJH2 165 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 Q5PR19 223 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 METTL11BQ5VVY1 283 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 FAM71F2Q6NXP2 309 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 KCTD9Q7L273 389 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 SLC25A42Q86VD7 318 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 TCTEX1D1Q8N7M0 179 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 OR2AK2Q8NG84 335 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 DACT3Q96B18 629 aaPredicted RBP8.36□□□□□ -1.07
USP39-215ENST00000481409 UPRTQ96BW1 309 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 PIPOXQ9P0Z9 390 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 RBM7Q9Y580 266 aaKnown RBP8.36□□□□□ -1.07
USP39-215ENST00000481409 KIAA2026Q5HYC2 2103 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 ARID1AO14497 2285 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 LRBAP50851 2863 aa8.36□□□□□ -1.07
USP39-215ENST00000481409 DCHS2Q6V1P9 2916 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 TRAV39A0A0B4J263 110 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 TRAV20A0A0B4J274 112 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 IGHV4-61A0A0C4DH41 118 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 RNF212BA8MTL3 300 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 SNRPGP15A8MWD9 76 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 C22orf46C9J442 243 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 PRTN3P24158 256 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 PRRX1P54821 245 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 DHODHQ02127 395 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 PAX2Q02962 417 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 TUSC1Q2TAM9 212 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 ABCA11PQ4W5N1 156 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 NCR3LG1Q68D85 454 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 ZNF645Q8N7E2 425 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 BVESQ8NE79 360 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms