RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 C1orf100Q5SVJ3 147 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 Q6ZS46 218 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 OR2W3Q7Z3T1 314 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 LYPD6Q86Y78 171 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 PRR18Q8N4B5 295 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 OR2AK2Q8NG84 335 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 ST6GALNAC6Q969X2 333 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 EAF1Q96JC9 268 aaPredicted RBP9.09□□□□□ -0.95
CCM2-213ENST00000480658 TMED9Q9BVK6 235 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 ABCG5Q9H222 651 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 TAF9BQ9HBM6 251 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 PIPOXQ9P0Z9 390 aa9.09□□□□□ -0.95
CCM2-213ENST00000480658 A0A1W2PP11 408 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 SLC22A1O15245 554 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 YPEL1O60688 119 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 MPIG6BO95866 241 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 IGHV3-7P01780 117 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 UCHL1P09936 223 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 ARSBP15848 533 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 VDAC1P21796 283 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 MYF6P23409 242 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 SOX6P35712 828 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 MLLT11Q13015 90 aaPredicted RBP9.08□□□□□ -0.96
CCM2-213ENST00000480658 NKAPLQ5M9Q1 402 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 LAIR2Q6ISS4 152 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 UNQ9370/PRO34162Q6UXP9 181 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 PRSS48Q7RTY5 328 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 CEACAM19Q7Z692 300 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 C1QL4Q86Z23 238 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 LYG1Q8N1E2 194 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 STPG2Q8N412 459 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 Q8N6K4 173 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 ZNF439Q8NDP4 499 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 TMEM104Q8NE00 496 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 OR4K15Q8NH41 348 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 EDARADDQ8WWZ3 215 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 FAM46BQ96A09 425 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 PHF21AQ96BD5 680 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 ORAI1Q96D31 301 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 YPEL2Q96QA6 119 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 TM2D1Q9BX74 207 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 BANF2Q9H503 90 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 CHMP1AQ9HD42 196 aaPredicted RBP9.08□□□□□ -0.96
CCM2-213ENST00000480658 ACOT13Q9NPJ3 140 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 PLEKHJ1Q9NW61 149 aa9.08□□□□□ -0.96
CCM2-213ENST00000480658 LSM2Q9Y333 95 aaKnown RBP9.08□□□□□ -0.96
CCM2-213ENST00000480658 A0A1W2PRX2 142 aa9.07□□□□□ -0.96
CCM2-213ENST00000480658 ITGB1BP1O14713 200 aa9.07□□□□□ -0.96
CCM2-213ENST00000480658 ELANEP08246 267 aa9.07□□□□□ -0.96
CCM2-213ENST00000480658 GPR12P47775 334 aa9.07□□□□□ -0.96
CCM2-213ENST00000480658 RPL23AP62750 156 aaKnown RBP9.07□□□□□ -0.96
CCM2-213ENST00000480658 MRPS15P82914 257 aaKnown RBP9.07□□□□□ -0.96
CCM2-213ENST00000480658 PNLIPRP3Q17RR3 467 aa9.07□□□□□ -0.96
CCM2-213ENST00000480658 MORN2Q502X0 79 aa9.07□□□□□ -0.96
CCM2-213ENST00000480658 CXorf66Q5JRM2 361 aaPredicted RBP9.07□□□□□ -0.96
CCM2-213ENST00000480658 OR8U1Q8NH10 309 aa9.07□□□□□ -0.96
CCM2-213ENST00000480658 S1PR3Q99500 378 aa9.07□□□□□ -0.96
CCM2-213ENST00000480658 DUSP21Q9H596 190 aa9.07□□□□□ -0.96
CCM2-213ENST00000480658 PLGRKTQ9HBL7 147 aa9.07□□□□□ -0.96
CCM2-213ENST00000480658 KIAA1456Q9P272 454 aa9.07□□□□□ -0.96
CCM2-213ENST00000480658 HSF4Q9ULV5 492 aa9.07□□□□□ -0.96
CCM2-213ENST00000480658 NOTCH1P46531 2555 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 IGHV3-43A0A0B4J1X8 118 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 A0A1W2PPE3 182 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 UBE2QL1A1L167 161 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 OR5H14A6NHG9 310 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 NUDT19A8MXV4 375 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 SLC17A2O00624 439 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 RAB29O14966 203 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 MRPS14O60783 128 aaKnown RBP9.06□□□□□ -0.96
CCM2-213ENST00000480658 IGF1P05019 195 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 HSMCR30P0CW71 290 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 IGHV3-43DP0DP04 118 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 VSIG8P0DPA2 414 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 CPEP16870 476 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 RCC1P18754 421 aaPredicted RBP9.06□□□□□ -0.96
CCM2-213ENST00000480658 CHATP28329 748 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 MC5RP33032 325 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 MYCNOSP40205 109 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 REG1BP48304 166 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 AQP4P55087 323 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 FOXE3Q13461 319 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 TPBGQ13641 420 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 HNF4GQ14541 408 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 ARL6IP1Q15041 203 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 TBCEQ15813 527 aaPredicted RBP9.06□□□□□ -0.96
CCM2-213ENST00000480658 LIPKQ5VXJ0 399 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 ZNF695Q8IW36 515 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 FAM71E2Q8N5Q1 922 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 OR56B1Q8NGI3 324 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 MRPL30Q8TCC3 161 aaKnown RBP9.06□□□□□ -0.96
CCM2-213ENST00000480658 MRAPQ8TCY5 172 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 CCDC90BQ9GZT6 254 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 C12orf4Q9NQ89 552 aa9.06□□□□□ -0.96
CCM2-213ENST00000480658 TRBV6-6A0A0A6YYG2 114 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 TRAV39A0A0B4J263 110 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 TMEM14DPA8MWL7 114 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 PDCD5O14737 125 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 RBBP9O75884 186 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 DIRAS3O95661 229 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms