RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 APOBEC3DQ96AK3 386 aaPredicted RBP4.25□□□□□ -1.73
COMMD3-212ENST00000479958 S100PBPQ96BU1 408 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 ZNF488Q96MN9 340 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 BEX2Q9BXY8 128 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 SELENOIQ9C0D9 397 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 OR2J1Q9GZK6 312 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 SLC22A4Q9H015 551 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 PRORYQ9H606 182 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 ELL3Q9HB65 397 aaPredicted RBP4.25□□□□□ -1.73
COMMD3-212ENST00000479958 BEX1Q9HBH7 125 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 CDH20Q9HBT6 801 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 HRASLSQ9HDD0 168 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 ATPIF1Q9UII2 106 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 FLVCR2Q9UPI3 526 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 RBMX2Q9Y388 322 aaKnown RBP4.25□□□□□ -1.73
COMMD3-212ENST00000479958 TMED3Q9Y3Q3 217 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 SLC25A15Q9Y619 301 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 CACNG2Q9Y698 323 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 SHANK1Q9Y566 2161 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 CADP27708 2225 aa4.25□□□□□ -1.73
COMMD3-212ENST00000479958 TPRP12270 2363 aaKnown RBP4.24□□□□□ -1.73
COMMD3-212ENST00000479958 TRAV6A0A075B6T7 132 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 IGHV2OR16-5A0A0B4J2B6 119 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 ZNF816-ZNF321PA0A0X1KG74 233 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 FAM240BA0A1B0GVZ2 78 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 ANKRD20A5PA0PJZ0 165 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 PQLC2LA1A4F0 135 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 OR5H1A6NKK0 313 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 DHRS7CA6NNS2 312 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 FOXI3A8MTJ6 420 aaPredicted RBP4.24□□□□□ -1.73
COMMD3-212ENST00000479958 ZNF732B4DXR9 585 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 EEF1E1-BLOC1S5C9J1V9 151 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 GABARAPH6UMI1 98 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 H7C417 338 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 SYNGR1O43759 233 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 SMPD2O60906 423 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 PFDN1O60925 122 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 CST4P01036 141 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 CRHP06850 196 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 SFTPBP07988 381 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 ERCC1P07992 297 aaPredicted RBP4.24□□□□□ -1.73
COMMD3-212ENST00000479958 ZNF35P13682 527 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 SELEP16581 610 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 RPL35AP18077 110 aaKnown RBP4.24□□□□□ -1.73
COMMD3-212ENST00000479958 SERPINA2P20848 420 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 GIFP27352 417 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 PRSS3P35030 304 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 NPBWR2P48146 333 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 INPP1P49441 399 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 GPM6AP51674 278 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 PPP1CBP62140 327 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 RPS27AP62979 156 aaKnown RBP4.24□□□□□ -1.73
COMMD3-212ENST00000479958 TGFBR3Q03167 851 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 PSG7Q13046 419 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 ESPL1Q14674 2120 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 TBC1D28Q2M2D7 210 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 PIGYQ3MUY2 71 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 RSBN1Q5VWQ0 802 aaPredicted RBP4.24□□□□□ -1.73
COMMD3-212ENST00000479958 ASCL4Q6XD76 172 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 MRPL21Q7Z2W9 205 aaKnown RBP4.24□□□□□ -1.73
COMMD3-212ENST00000479958 OR2W3Q7Z3T1 314 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 C5orf24Q7Z6I8 188 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 DPPA2Q7Z7J5 298 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 WDR86Q86TI4 376 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 LRP11Q86VZ4 500 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 CDH26Q8IXH8 852 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 TOMM5Q8N4H5 51 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 GVQW1Q8N7I0 195 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 MINDY2Q8NBR6 621 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 RELL2Q8NC24 303 aaPredicted RBP4.24□□□□□ -1.73
COMMD3-212ENST00000479958 CCDC54Q8NEL0 328 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 OR4S1Q8NGB4 309 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 OR51T1Q8NGJ9 327 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 OR10R2Q8NGX6 335 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 OR8S1Q8NH09 359 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 MAFIPQ8WZ33 124 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 AQP3Q92482 292 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 PTX4Q96A99 478 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 UPRTQ96BW1 309 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 ARHGAP5-AS1Q96IT6 56 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 PAPOLGQ9BWT3 736 aaKnown RBP4.24□□□□□ -1.73
COMMD3-212ENST00000479958 RGCCQ9H4X1 137 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 NEK6Q9HC98 313 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 DIABLOQ9NR28 239 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 RBFOX1Q9NWB1 397 aaKnown RBP4.24□□□□□ -1.73
COMMD3-212ENST00000479958 MTFP1Q9UDX5 166 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 KCNN3Q9UGI6 736 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 NBASA2RRP1 2371 aa4.24□□□□□ -1.73
COMMD3-212ENST00000479958 HEATR1Q9H583 2144 aaKnown RBP4.24□□□□□ -1.73
COMMD3-212ENST00000479958 SPTA1P02549 2419 aa4.23□□□□□ -1.73
COMMD3-212ENST00000479958 COL6A6A6NMZ7 2263 aa4.23□□□□□ -1.73
COMMD3-212ENST00000479958 IGKV1D-8A0A087WSZ0 117 aa4.23□□□□□ -1.73
COMMD3-212ENST00000479958 TRGV8A0A0C4DH27 118 aa4.23□□□□□ -1.73
COMMD3-212ENST00000479958 A8MXE2 369 aa4.23□□□□□ -1.73
COMMD3-212ENST00000479958 M0R1B8 84 aa4.23□□□□□ -1.73
COMMD3-212ENST00000479958 RHBDL1O75783 438 aa4.23□□□□□ -1.73
COMMD3-212ENST00000479958 IGKV3-15P01624 115 aa4.23□□□□□ -1.73
COMMD3-212ENST00000479958 CD3DP04234 171 aa4.23□□□□□ -1.73
COMMD3-212ENST00000479958 ZNF735P0CB33 412 aa4.23□□□□□ -1.73
COMMD3-212ENST00000479958 MGMTP16455 207 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms