RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 MRPL3P09001 348 aaKnown RBP5.47□□□□□ -1.53
VCP-205ENST00000479300 NDUFB7P17568 137 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 ADCYAP1P18509 176 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 RCC1P18754 421 aaPredicted RBP5.47□□□□□ -1.53
VCP-205ENST00000479300 CELP19835 753 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 GLRA1P23415 457 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 ATP6V1E1P36543 226 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 GABRA2P47869 451 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 RAB5CP51148 216 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 ARF6P62330 175 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 GNG3P63215 75 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 BLOC1S1P78537 153 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 HOXA4Q00056 320 aaPredicted RBP5.47□□□□□ -1.53
VCP-205ENST00000479300 SSX2Q16385 188 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 WDR38Q5JTN6 314 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 UBE2NLQ5JXB2 153 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 ZNF684Q5T5D7 378 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 TEX36Q5VZQ5 186 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 PLCXD3Q63HM9 321 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 DEGS2Q6QHC5 323 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 ZNF322Q6U7Q0 402 aaPredicted RBP5.47□□□□□ -1.53
VCP-205ENST00000479300 ZNF841Q6ZN19 808 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 OR2W3Q7Z3T1 314 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 NR2C2APQ86WQ0 139 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 ANGPTL5Q86XS5 388 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 FAM90A1Q86YD7 464 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 TMEM86BQ8N661 226 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 GCSAMQ8N6F7 178 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 DNAAF1Q8NEP3 725 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 OR2AK2Q8NG84 335 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 C2CD4CQ8TF44 421 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 SSMEM1Q8WWF3 244 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 MALSU1Q96EH3 234 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 RHOVQ96L33 236 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 CNN2Q99439 309 aaKnown RBP5.47□□□□□ -1.53
VCP-205ENST00000479300 GINS4Q9BRT9 223 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 ZNF649Q9BS31 505 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 C2orf88Q9BSF0 95 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 INPP5EQ9NRR6 644 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 HAO2Q9NYQ3 351 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 KAAG1Q9UBP8 84 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 CTSZQ9UBR2 303 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 CBY1Q9Y3M2 126 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 LRP12Q9Y561 859 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 KPTNQ9Y664 436 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 POMT1Q9Y6A1 747 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 NOTCH3Q9UM47 2321 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 PLXNB1O43157 2135 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 A0A0U1RQV5 110 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 CENPVL3A0A0U1RRI6 287 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 hCG_1809904A0A1W2PP81 198 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 A0A1W2PPE2 198 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 A0A1W2PR64 198 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 A0A1W2PRV1 198 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 ANKRD20A5PA0PJZ0 165 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 C5orf63A6NC05 138 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 RNF222A6NCQ9 220 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 OR5B21A6NL26 309 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 ZNF732B4DXR9 585 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 AP4M1O00189 453 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 TNFRSF13BO14836 293 aaPredicted RBP5.46□□□□□ -1.54
VCP-205ENST00000479300 PIN1P1O15428 100 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 GPR137BO60478 399 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 FCN3O75636 299 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 LHBP01229 141 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 IGHV4-59P01825 116 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 MT-ND4LP03901 98 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 SLC25A4P12235 298 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 MMP9P14780 707 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 ALOX5APP20292 161 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 HTR1FP30939 366 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 DCTDP32321 178 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 FAUP35544 74 aaKnown RBP5.46□□□□□ -1.54
VCP-205ENST00000479300 RBP2P50120 134 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 GPM6AP51674 278 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 RPL15P61313 204 aaKnown RBP5.46□□□□□ -1.54
VCP-205ENST00000479300 HMGN3Q15651 99 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 NCR3LG1Q68D85 454 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 LPCAT3Q6P1A2 487 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 WDR82Q6UXN9 313 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 Q6ZSV7 163 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 MEPCEQ7L2J0 689 aaKnown RBP5.46□□□□□ -1.54
VCP-205ENST00000479300 VMO1Q7Z5L0 202 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 BCDIN3DQ7Z5W3 292 aaKnown RBP5.46□□□□□ -1.54
VCP-205ENST00000479300 GID4Q8IVV7 300 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 ZNF679Q8IYX0 411 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 ZFP41Q8N8Y5 198 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 OR8B12Q8NGG6 310 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 OR5A2Q8NGI9 324 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 NPRL2Q8WTW4 380 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 OR5P3Q8WZ94 311 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 EAF1Q96JC9 268 aaPredicted RBP5.46□□□□□ -1.54
VCP-205ENST00000479300 TBX15Q96SF7 602 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 AMELYQ99218 206 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 TEAD3Q99594 435 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 PBOV1Q9GZY1 135 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 TUBA4BQ9H853 241 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 MOB1AQ9H8S9 216 aa5.46□□□□□ -1.54
VCP-205ENST00000479300 SLC25A10Q9UBX3 287 aaPredicted RBP5.46□□□□□ -1.54
VCP-205ENST00000479300 RPUSD1Q9UJJ7 312 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms