RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 SLC36A1Q7Z2H8 476 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 NRARPQ7Z6K4 114 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 PEG10Q86TG7 708 aaKnown RBP5.5□□□□□ -1.53
USP48-208ENST00000479177 FGFRL1Q8N441 504 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 SPICQ8N5J4 248 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 ZNF525Q8N782 197 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 TPRX1Q8N7U7 411 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 MINDY2Q8NBR6 621 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 OR5H2Q8NGV7 314 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 OR4K15Q8NH41 348 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 OR56B4Q8NH76 319 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 CHPT1Q8WUD6 406 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 RAB1CQ92928 201 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 MED30Q96HR3 178 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 CABLES2Q9BTV7 478 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 NCOR1P1Q9H4R4 102 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 ING3Q9NXR8 418 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 MGAT4AQ9UM21 535 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 MAST4O15021 2626 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 PDZD2O15018 2839 aa5.5□□□□□ -1.53
USP48-208ENST00000479177 NBPF19A0A087WUL8 3843 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 MEIKINA0A087WXM9 373 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 IGKV1-6A0A0C4DH72 117 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 KIR2DS1A0A191URI9 304 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 CENPXA8MT69 81 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 TRDCB7Z8K6 153 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 C12orf77C9JDV5 145 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 NPIPB11E5RHQ5 1161 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 FABP7O15540 132 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 PMP2P02689 132 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 GSTT2P0CG29 244 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 RPS2P15880 293 aaKnown RBP5.49□□□□□ -1.53
USP48-208ENST00000479177 GLP1RP43220 463 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 KIR2DS4P43632 304 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 PDLIM4P50479 330 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 ATP5J2P56134 94 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 EDDM3BP56851 147 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 ARPC4P59998 168 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 KIR2DS1Q14954 304 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 HERPUD1Q15011 391 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 CDK10Q15131 360 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 TRIM16LQ309B1 348 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 CHRFAM7AQ494W8 412 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 LRRC10Q5BKY1 277 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 C6orf183Q5T699 404 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 C5orf24Q7Z6I8 188 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 ZNF554Q86TJ5 538 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 GLCCI1Q86VQ1 547 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 CENPSQ8N2Z9 138 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 ARRDC1Q8N5I2 433 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 OR5AP2Q8NGF4 316 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 OR5D13Q8NGL4 314 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 OR13A1Q8NGR1 328 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 ENKURQ8TC29 256 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 MRGPRDQ8TDS7 321 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 CCDC107Q8WV48 283 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 SLC6A7Q99884 636 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 DCTN5Q9BTE1 182 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 MCUBQ9NWR8 336 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 SLC2A8Q9NY64 477 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 EHFQ9NZC4 300 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 SLC25A10Q9UBX3 287 aaPredicted RBP5.49□□□□□ -1.53
USP48-208ENST00000479177 TRAPPC2LQ9UL33 140 aa5.49□□□□□ -1.53
USP48-208ENST00000479177 PRRC2AP48634 2157 aaKnown RBP5.49□□□□□ -1.53
USP48-208ENST00000479177 FAM240BA0A1B0GVZ2 78 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 FUOMA2VDF0 154 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 DISC1C4P0D8 188 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 C15orf65H3BRN8 121 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 SDCBPO00560 298 aaPredicted RBP5.48□□□□□ -1.53
USP48-208ENST00000479177 DVL1O14640 695 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 NDUFB3O43676 98 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 NDUFB6O95139 128 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 DIRAS3O95661 229 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 SCTP09683 121 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 OR5H8P0DN80 308 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 NDUFB7P17568 137 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 SSTR5P35346 364 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 OR3A3P47888 321 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 CCR6P51684 374 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 MEF2CQ06413 473 aaPredicted RBP5.48□□□□□ -1.53
USP48-208ENST00000479177 ZNF660Q6AZW8 331 aaPredicted RBP5.48□□□□□ -1.53
USP48-208ENST00000479177 TRAT1Q6PIZ9 186 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 CCBE1Q6UXH8 406 aaPredicted RBP5.48□□□□□ -1.53
USP48-208ENST00000479177 ZNF782Q6ZMW2 699 aaPredicted RBP5.48□□□□□ -1.53
USP48-208ENST00000479177 ZNF841Q6ZN19 808 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 OVCH2Q7RTZ1 564 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 LHFPL1Q86WI0 220 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 DUSP18Q8NEJ0 188 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 OR8B3Q8NGG8 313 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 OR51S1Q8NGJ8 323 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 OR4A4PQ8NGN8 299 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 OR13C8Q8NGS7 320 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 OR1L1Q8NH94 360 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 UBALD1Q8TB05 177 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 C10orf105Q8TEF2 133 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 MRGPRFQ96AM1 343 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 UPRTQ96BW1 309 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 PERPQ96FX8 193 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 LURAP1Q96LR2 239 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 OR8B2Q96RD0 313 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms