RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 SERPINE3A8MV23 424 aa16.53■□□□□ 0.24
VARS-224ENST00000479051 RAB27BO00194 218 aa16.53■□□□□ 0.24
VARS-224ENST00000479051 RGS11O94810 467 aa16.53■□□□□ 0.24
VARS-224ENST00000479051 HIST1H1DP16402 221 aaKnown RBP16.53■□□□□ 0.24
VARS-224ENST00000479051 RAG2P55895 527 aa16.53■□□□□ 0.24
VARS-224ENST00000479051 HTD2P86397 168 aa16.53■□□□□ 0.24
VARS-224ENST00000479051 MOGAT2Q3SYC2 334 aa16.53■□□□□ 0.24
VARS-224ENST00000479051 UTF1Q5T230 341 aa16.53■□□□□ 0.24
VARS-224ENST00000479051 ZNF880Q6PDB4 577 aa16.53■□□□□ 0.24
VARS-224ENST00000479051 LINC00311Q8N616 119 aa16.53■□□□□ 0.24
VARS-224ENST00000479051 CYYR1Q96J86 154 aa16.53■□□□□ 0.24
VARS-224ENST00000479051 OCSTAMPQ9BR26 566 aa16.53■□□□□ 0.24
VARS-224ENST00000479051 C1RLQ9NZP8 487 aa16.53■□□□□ 0.24
VARS-224ENST00000479051 TCF19Q9Y242 345 aa16.53■□□□□ 0.24
VARS-224ENST00000479051 A0A075B6Q4 140 aa16.52■□□□□ 0.24
VARS-224ENST00000479051 A0A1B0GUS0 222 aa16.52■□□□□ 0.24
VARS-224ENST00000479051 LY6LH3BQJ8 138 aa16.52■□□□□ 0.24
VARS-224ENST00000479051 NDUFA7O95182 113 aa16.52■□□□□ 0.24
VARS-224ENST00000479051 LPLP06858 475 aa16.52■□□□□ 0.24
VARS-224ENST00000479051 GNB3P16520 340 aa16.52■□□□□ 0.24
VARS-224ENST00000479051 SERPINB10P48595 397 aa16.52■□□□□ 0.24
VARS-224ENST00000479051 AWAT1Q58HT5 328 aa16.52■□□□□ 0.24
VARS-224ENST00000479051 STEAP3Q658P3 488 aa16.52■□□□□ 0.24
VARS-224ENST00000479051 GPR141Q7Z602 305 aa16.52■□□□□ 0.24
VARS-224ENST00000479051 OR10V1Q8NGI7 309 aa16.52■□□□□ 0.24
VARS-224ENST00000479051 HDHD3Q9BSH5 251 aaPredicted RBP16.52■□□□□ 0.24
VARS-224ENST00000479051 BEX1Q9HBH7 125 aa16.52■□□□□ 0.24
VARS-224ENST00000479051 RHBDL2Q9NX52 303 aa16.52■□□□□ 0.24
VARS-224ENST00000479051 A0A1W2PPE3 182 aa16.51■□□□□ 0.23
VARS-224ENST00000479051 MFNGO00587 321 aa16.51■□□□□ 0.23
VARS-224ENST00000479051 TGFBR1P36897 503 aa16.51■□□□□ 0.23
VARS-224ENST00000479051 TALDO1P37837 337 aa16.51■□□□□ 0.23
VARS-224ENST00000479051 RAB7AP51149 207 aa16.51■□□□□ 0.23
VARS-224ENST00000479051 RAB13P51153 203 aa16.51■□□□□ 0.23
VARS-224ENST00000479051 HLA-DRB3P79483 266 aa16.51■□□□□ 0.23
VARS-224ENST00000479051 ARFRP1Q13795 201 aa16.51■□□□□ 0.23
VARS-224ENST00000479051 C3orf56Q8N813 242 aa16.51■□□□□ 0.23
VARS-224ENST00000479051 DTX3Q8N9I9 347 aa16.51■□□□□ 0.23
VARS-224ENST00000479051 PIFOQ8TCI5 191 aa16.51■□□□□ 0.23
VARS-224ENST00000479051 IL1F10Q8WWZ1 152 aa16.51■□□□□ 0.23
VARS-224ENST00000479051 Q9N2K0 584 aa16.51■□□□□ 0.23
VARS-224ENST00000479051 RPS19P39019 145 aaKnown RBP16.5■□□□□ 0.23
VARS-224ENST00000479051 NCS1P62166 190 aa16.5■□□□□ 0.23
VARS-224ENST00000479051 ANKRD13BQ86YJ7 626 aa16.5■□□□□ 0.23
VARS-224ENST00000479051 OR8H3Q8N146 312 aa16.5■□□□□ 0.23
VARS-224ENST00000479051 OR52L2PQ8NGH6 319 aa16.5■□□□□ 0.23
VARS-224ENST00000479051 SPATA2Q9UM82 520 aa16.5■□□□□ 0.23
VARS-224ENST00000479051 KCNK7Q9Y2U2 307 aa16.5■□□□□ 0.23
VARS-224ENST00000479051 A6NDX4 124 aa16.49■□□□□ 0.23
VARS-224ENST00000479051 YPEL1O60688 119 aa16.49■□□□□ 0.23
VARS-224ENST00000479051 GAPDHP04406 335 aaKnown RBP16.49■□□□□ 0.23
VARS-224ENST00000479051 ALDH3B2P48448 385 aa16.49■□□□□ 0.23
VARS-224ENST00000479051 VBP1P61758 197 aa16.49■□□□□ 0.23
VARS-224ENST00000479051 MORN2Q502X0 79 aa16.49■□□□□ 0.23
VARS-224ENST00000479051 LY6G6FQ5SQ64 297 aa16.49■□□□□ 0.23
VARS-224ENST00000479051 OLFML2AQ68BL7 652 aa16.49■□□□□ 0.23
VARS-224ENST00000479051 SLC25A48Q6ZT89 311 aaKnown RBP16.49■□□□□ 0.23
VARS-224ENST00000479051 CAPSLQ8WWF8 208 aa16.49■□□□□ 0.23
VARS-224ENST00000479051 YPEL2Q96QA6 119 aa16.49■□□□□ 0.23
VARS-224ENST00000479051 NPFFR1Q9GZQ6 430 aa16.49■□□□□ 0.23
VARS-224ENST00000479051 MMP24Q9Y5R2 645 aa16.49■□□□□ 0.23
VARS-224ENST00000479051 A0A0A6YYH2 397 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 A6NJ64 397 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 HSD17B6O14756 317 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 GABARAPO95166 117 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 TFAP2AP05549 437 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 GSTP1P09211 210 aaKnown RBP16.48■□□□□ 0.23
VARS-224ENST00000479051 PPP1CCP36873 323 aaKnown RBP16.48■□□□□ 0.23
VARS-224ENST00000479051 KIR2DS4P43632 304 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 GNMTQ14749 295 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 KIR2DS1Q14954 304 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 CDNFQ49AH0 187 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 GPR107Q5VW38 600 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 ZNF439Q8NDP4 499 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 OR2AK2Q8NG84 335 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 OR4C13Q8NGP0 309 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 OR5H6Q8NGV6 325 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 SLC25A46Q96AG3 418 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 KCTD12Q96CX2 325 aaKnown RBP16.48■□□□□ 0.23
VARS-224ENST00000479051 AKR1E2Q96JD6 320 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 ABHD14AQ9BUJ0 271 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.48■□□□□ 0.23
VARS-224ENST00000479051 DIABLOQ9NR28 239 aa16.48■□□□□ 0.23
VARS-224ENST00000479051 TRDCB7Z8K6 153 aa16.47■□□□□ 0.23
VARS-224ENST00000479051 HSPA12AO43301 675 aa16.47■□□□□ 0.23
VARS-224ENST00000479051 TXNL1O43396 289 aa16.47■□□□□ 0.23
VARS-224ENST00000479051 FCGR3AP08637 254 aa16.47■□□□□ 0.23
VARS-224ENST00000479051 FAM106CPP0CH98 169 aa16.47■□□□□ 0.23
VARS-224ENST00000479051 MDKP21741 143 aaPredicted RBP16.47■□□□□ 0.23
VARS-224ENST00000479051 ZBTB25P24278 435 aa16.47■□□□□ 0.23
VARS-224ENST00000479051 PITPNAQ00169 270 aa16.47■□□□□ 0.23
VARS-224ENST00000479051 RELBQ01201 579 aa16.47■□□□□ 0.23
VARS-224ENST00000479051 ZNF816Q0VGE8 651 aaPredicted RBP16.47■□□□□ 0.23
VARS-224ENST00000479051 CT45A1Q5HYN5 189 aa16.47■□□□□ 0.23
VARS-224ENST00000479051 FAM53AQ6NSI3 398 aaPredicted RBP16.47■□□□□ 0.23
VARS-224ENST00000479051 Q6ZPA2 131 aa16.47■□□□□ 0.23
VARS-224ENST00000479051 C16orf82Q7Z2V1 217 aa16.47■□□□□ 0.23
VARS-224ENST00000479051 TMEM219Q86XT9 240 aa16.47■□□□□ 0.23
VARS-224ENST00000479051 CT45A3Q8NHU0 189 aa16.47■□□□□ 0.23
VARS-224ENST00000479051 TAF15Q92804 592 aaKnown RBP eCLIP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms