RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 ATP6V0E1O15342 81 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 LANCL1O43813 399 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 IGFBP3P17936 291 aaPredicted RBP10.33□□□□□ -0.76
VCL-205ENST00000478896 CHATP28329 748 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 INSL3P51460 131 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 ZNF616Q08AN1 781 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 MED21Q13503 144 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 Q499Y3 187 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 YIF1BQ5BJH7 314 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 MRPS24Q96EL2 167 aaKnown RBP10.33□□□□□ -0.76
VCL-205ENST00000478896 UBE2E2Q96LR5 201 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 SLC29A1Q99808 456 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 ABHD14AQ9BUJ0 271 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 BANF2Q9H503 90 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 GNB4Q9HAV0 340 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 ISYNA1Q9NPH2 558 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 CHCHD3Q9NX63 227 aaKnown RBP10.33□□□□□ -0.76
VCL-205ENST00000478896 FAM53CQ9NYF3 392 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 KCNIP1Q9NZI2 227 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 ZNF580Q9UK33 172 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 VSIG4Q9Y279 399 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 WSB1Q9Y6I7 421 aa10.33□□□□□ -0.76
VCL-205ENST00000478896 TRAV8-7A0A075B6U6 113 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 TRBV5-5A0A0J9YX44 114 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 G3V318 75 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 OGG1O15527 345 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 CRTAPO75718 401 aaPredicted RBP10.32□□□□□ -0.76
VCL-205ENST00000478896 MAS1P04201 325 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 RCC1P18754 421 aaPredicted RBP10.32□□□□□ -0.76
VCL-205ENST00000478896 FSTP19883 344 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 ACTBP60709 375 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 FAM27D1Q5T7N8 215 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 C10orf67Q8IYJ2 551 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 ZFP41Q8N8Y5 198 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 OR1N2Q8NGR9 330 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 GHSRQ92847 366 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 CHCHD6Q9BRQ6 235 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 SELENOIQ9C0D9 397 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 OR51J1Q9H342 316 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 TAF9BQ9HBM6 251 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 BABAM2Q9NXR7 383 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 KIAA1456Q9P272 454 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 JPT1Q9UK76 154 aa10.32□□□□□ -0.76
VCL-205ENST00000478896 EXOSC1Q9Y3B2 195 aaKnown RBP10.32□□□□□ -0.76
VCL-205ENST00000478896 TRAV41A0A0B4J266 112 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 PNMA8CA0A1B0GUJ8 204 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 A0A1W2PPK0 400 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 UBE2QL1A1L167 161 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 NBR2O15453 112 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 SAP30O75446 220 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 CA11O75493 328 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 WBP4O75554 376 aaKnown RBP10.31□□□□□ -0.76
VCL-205ENST00000478896 MGMTP16455 207 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 PPIFP30405 207 aaKnown RBP10.31□□□□□ -0.76
VCL-205ENST00000478896 VHLP40337 213 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 GNB1P62873 340 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 ADARB1P78563 741 aaKnown RBP10.31□□□□□ -0.76
VCL-205ENST00000478896 GABPB1Q06547 395 aaPredicted RBP10.31□□□□□ -0.76
VCL-205ENST00000478896 GNMTQ14749 295 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 ECSCRQ19T08 205 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 MORN2Q502X0 79 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 STEAP3Q658P3 488 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 ZNF491Q8N8L2 437 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 OR52L2PQ8NGH6 319 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 MYOZ3Q8TDC0 251 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 OR14A2Q96R54 314 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 MRPL20Q9BYC9 149 aaKnown RBP10.31□□□□□ -0.76
VCL-205ENST00000478896 KLK15Q9H2R5 256 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 SMPD3Q9NY59 655 aaPredicted RBP10.31□□□□□ -0.76
VCL-205ENST00000478896 DIMT1Q9UNQ2 313 aaKnown RBP10.31□□□□□ -0.76
VCL-205ENST00000478896 COL7A1Q02388 2944 aa10.31□□□□□ -0.76
VCL-205ENST00000478896 IGHV7-81A0A0B4J1V7 117 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 FAM90A10PA6NDY2 464 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 FAM90A7PA6NKC0 464 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 FAM90A23PA8MXZ1 464 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 I3L521 148 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 OVOL1O14753 267 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 RGS11O94810 467 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 LALBAP00709 142 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 HLA-DRB1P01911 266 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 CNTFRP26992 372 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 PPP1CCP36873 323 aaKnown RBP10.3□□□□□ -0.76
VCL-205ENST00000478896 CAPGP40121 348 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 ASPHD1Q5U4P2 390 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 DMKNQ6E0U4 476 aaPredicted RBP10.3□□□□□ -0.76
VCL-205ENST00000478896 ZNF429Q86V71 674 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 PQLC1Q8N2U9 271 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 ABHD5Q8WTS1 349 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 DCUN1D4Q92564 292 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 PGLYRP3Q96LB9 341 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 ANKRD60Q9BZ19 345 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 CLEC2DQ9UHP7 191 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 ERGIC3Q9Y282 383 aa10.3□□□□□ -0.76
VCL-205ENST00000478896 SAA2-SAA4A0A096LPE2 208 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 A0A1W2PN81 502 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 GPX5O75715 221 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 SC5DO75845 299 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 SAA2P0DJI9 122 aaPredicted RBP10.29□□□□□ -0.76
VCL-205ENST00000478896 FUT3P21217 361 aa10.29□□□□□ -0.76
VCL-205ENST00000478896 BLVRBP30043 206 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms