RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 NTN4Q9HB63 628 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 UBQLN4Q9NRR5 601 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 UBAP1Q9NZ09 502 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 FIS1Q9Y3D6 152 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 KCNE3Q9Y6H6 103 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 WSB1Q9Y6I7 421 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 DOCK11Q5JSL3 2073 aa2.57□□□□□ -2
CDC42BPA-212ENST00000478573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.57□□□□□ -2
CDC42BPA-212ENST00000478573 OTOGQ6ZRI0 2925 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 CCDC168Q8NDH2 2452 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 IGLV11-55A0A075B6I3 123 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 LYRM9A8MSI8 78 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 FAAHO00519 579 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 SCN2BO60939 215 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 ENTPD5O75356 428 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 TRAPPC6AO75865 159 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 RAB3DO95716 219 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 IGKV1D-16P01601 117 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 HMGN2P05204 90 aaKnown RBP2.56□□□□□ -2
CDC42BPA-212ENST00000478573 SERPINE2P07093 398 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 ERCC1P07992 297 aaPredicted RBP2.56□□□□□ -2
CDC42BPA-212ENST00000478573 LINC00032P0C843 101 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 OR8G3PP0DMU2 310 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 BGNP21810 368 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 RPS4Y1P22090 263 aaKnown RBP2.56□□□□□ -2
CDC42BPA-212ENST00000478573 FKBP2P26885 142 aaKnown RBP2.56□□□□□ -2
CDC42BPA-212ENST00000478573 DCKP27707 260 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 GTF2E2P29084 291 aaKnown RBP2.56□□□□□ -2
CDC42BPA-212ENST00000478573 GABRA3P34903 492 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 EIF1P41567 113 aaKnown RBP2.56□□□□□ -2
CDC42BPA-212ENST00000478573 RPL14P50914 215 aaKnown RBP2.56□□□□□ -2
CDC42BPA-212ENST00000478573 P2RX1P51575 399 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 HBA1P69905 142 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 HPCAP84074 193 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 MXD1Q05195 221 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 STX3Q13277 289 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 APOFQ13790 326 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF141Q15928 474 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 ARHGAP11BQ3KRB8 267 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 SOHLH1Q5JUK2 328 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 CCNJQ5T5M9 372 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 CPTPQ5TA50 214 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 SAXO2Q658L1 398 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 C3orf33Q6P1S2 294 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 TMEM53Q6P2H8 277 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 DUX4L9Q6RFH8 374 aaPredicted RBP2.56□□□□□ -2
CDC42BPA-212ENST00000478573 SPNS3Q6ZMD2 512 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF493Q6ZR52 646 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 SSX8Q7RTT4 187 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 HDDC2Q7Z4H3 204 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 SPATA24Q86W54 205 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 CMTM1Q8IZ96 169 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 OFCC1Q8IZS5 231 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 COMMD1Q8N668 190 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 TRIML2Q8N7C3 387 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 DUSP18Q8NEJ0 188 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 OR6K3Q8NGY3 331 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 CLHC1Q8NHS4 586 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 DOK4Q8TEW6 326 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 ZFP90Q8TF47 636 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 CDS1Q92903 461 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 SLC35B4Q969S0 331 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 CPNE4Q96A23 557 aaPredicted RBP2.56□□□□□ -2
CDC42BPA-212ENST00000478573 FAM3DQ96BQ1 224 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 SEH1LQ96EE3 360 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 NEURL3Q96EH8 262 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 CCDC115Q96NT0 180 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 OR7D2Q96RA2 312 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 HDHD3Q9BSH5 251 aaPredicted RBP2.56□□□□□ -2
CDC42BPA-212ENST00000478573 DPY30Q9C005 99 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 DSN1Q9H410 356 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 RNF122Q9H9V4 155 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 CALML5Q9NZT1 146 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 CCDC59Q9P031 241 aaKnown RBP2.56□□□□□ -2
CDC42BPA-212ENST00000478573 MCTS1Q9ULC4 181 aaKnown RBP2.56□□□□□ -2
CDC42BPA-212ENST00000478573 SLC35A3Q9Y2D2 325 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 DSPPQ9NZW4 1301 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 ITPR3Q14573 2671 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 CELSR1Q9NYQ6 3014 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 C2CD3Q4AC94 2353 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 SPG11Q96JI7 2443 aa2.56□□□□□ -2
CDC42BPA-212ENST00000478573 FLNAP21333 2647 aaKnown RBP2.55□□□□□ -2
CDC42BPA-212ENST00000478573 TACC2O95359 2948 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.55□□□□□ -2
CDC42BPA-212ENST00000478573 KBTBD11-OT1A0A1B0GTJ5 212 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 SLC22A20A6NK97 555 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 EEF1E1-BLOC1S5C9J1V9 151 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 EEF1E1O43324 174 aaKnown RBP2.55□□□□□ -2
CDC42BPA-212ENST00000478573 CD5LO43866 347 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 KRT75O95678 551 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 ACSM4P0C7M7 580 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 CT45A6P0DMU7 189 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 CT45A5P0DMU8 189 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 CT45A7P0DMV0 189 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 CRYGSP22914 178 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 PPIBP23284 216 aaKnown RBP2.55□□□□□ -2
CDC42BPA-212ENST00000478573 ME2P23368 584 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 S100A3P33764 101 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 CD79BP40259 229 aa2.55□□□□□ -2
CDC42BPA-212ENST00000478573 CCR6P51684 374 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms