RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 OR1L1Q8NH94 360 aa18.59■□□□□ 0.57
C9orf3-215ENST00000478473 TMEM203Q969S6 136 aa18.59■□□□□ 0.57
C9orf3-215ENST00000478473 SULT4A1Q9BR01 284 aa18.59■□□□□ 0.57
C9orf3-215ENST00000478473 LRRC42Q9Y546 428 aa18.59■□□□□ 0.57
C9orf3-215ENST00000478473 PLXNB1O43157 2135 aa18.58■□□□□ 0.57
C9orf3-215ENST00000478473 IGHV3-43A0A0B4J1X8 118 aa18.58■□□□□ 0.56
C9orf3-215ENST00000478473 UBE2QL1A1L167 161 aa18.58■□□□□ 0.56
C9orf3-215ENST00000478473 SLC17A2O00624 439 aa18.58■□□□□ 0.56
C9orf3-215ENST00000478473 SLC31A2O15432 143 aa18.58■□□□□ 0.56
C9orf3-215ENST00000478473 IGHV3-43DP0DP04 118 aa18.58■□□□□ 0.56
C9orf3-215ENST00000478473 RPS25P62851 125 aaKnown RBP18.58■□□□□ 0.56
C9orf3-215ENST00000478473 MORN2Q502X0 79 aa18.58■□□□□ 0.56
C9orf3-215ENST00000478473 SAMD5Q5TGI4 173 aa18.58■□□□□ 0.56
C9orf3-215ENST00000478473 OR2W3Q7Z3T1 314 aa18.58■□□□□ 0.56
C9orf3-215ENST00000478473 FAM89BQ8N5H3 189 aa18.58■□□□□ 0.56
C9orf3-215ENST00000478473 EAF1Q96JC9 268 aaPredicted RBP18.58■□□□□ 0.56
C9orf3-215ENST00000478473 NEDD4LQ96PU5 975 aa18.58■□□□□ 0.56
C9orf3-215ENST00000478473 GNG12Q9UBI6 72 aa18.58■□□□□ 0.56
C9orf3-215ENST00000478473 JPT1Q9UK76 154 aa18.58■□□□□ 0.56
C9orf3-215ENST00000478473 BLOC1S6Q9UL45 172 aa18.58■□□□□ 0.56
C9orf3-215ENST00000478473 NAPSAO96009 420 aa18.57■□□□□ 0.56
C9orf3-215ENST00000478473 HSMCR30P0CW71 290 aa18.57■□□□□ 0.56
C9orf3-215ENST00000478473 NSUN5P1Q3KNT7 163 aa18.57■□□□□ 0.56
C9orf3-215ENST00000478473 ZNF880Q6PDB4 577 aa18.57■□□□□ 0.56
C9orf3-215ENST00000478473 LYG1Q8N1E2 194 aa18.57■□□□□ 0.56
C9orf3-215ENST00000478473 ACOT13Q9NPJ3 140 aa18.57■□□□□ 0.56
C9orf3-215ENST00000478473 ERICH4A6NGS2 130 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 SH2D7A6NKC9 451 aaPredicted RBP18.56■□□□□ 0.56
C9orf3-215ENST00000478473 LANCL1O43813 399 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 YPEL1O60688 119 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 MRPS14O60783 128 aaKnown RBP18.56■□□□□ 0.56
C9orf3-215ENST00000478473 IGHG2P01859 326 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 FABP5Q01469 135 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 HES1Q14469 280 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 HMGN3Q15651 99 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 MOB3BQ86TA1 216 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 TGIF2LXQ8IUE1 241 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 WFDC9Q8NEX5 89 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 OR2T10Q8NGZ9 312 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 YPEL2Q96QA6 119 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 CCDC90BQ9GZT6 254 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 LPAR5Q9H1C0 372 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 OR2S2Q9NQN1 319 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 KCNIP1Q9NZI2 227 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 NOTCH3Q9UM47 2321 aa18.56■□□□□ 0.56
C9orf3-215ENST00000478473 A0A0A6YYD4 124 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 TRBV6-6A0A0A6YYG2 114 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 FOXI3A8MTJ6 420 aaPredicted RBP18.55■□□□□ 0.56
C9orf3-215ENST00000478473 MAP2K4P45985 399 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 REG1BP48304 166 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 BEAN1Q3B7T3 259 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 CD200R1LQ6Q8B3 271 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 ZNF367Q7RTV3 350 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 C6orf201Q7Z4U5 140 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 OR4X2Q8NGF9 303 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 OR8H1Q8NGG4 311 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 R3HDM4Q96D70 268 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 CNBD2Q96M20 576 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 NICN1Q9BSH3 213 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 FAAP24Q9BTP7 215 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 PLSCR3Q9NRY6 295 aa18.55■□□□□ 0.56
C9orf3-215ENST00000478473 TSSC4Q9Y5U2 329 aaPredicted RBP18.55■□□□□ 0.56
C9orf3-215ENST00000478473 RANBP1P43487 201 aa18.54■□□□□ 0.56
C9orf3-215ENST00000478473 HNF4GQ14541 408 aa18.54■□□□□ 0.56
C9orf3-215ENST00000478473 NKAPLQ5M9Q1 402 aa18.54■□□□□ 0.56
C9orf3-215ENST00000478473 Q6ZPA2 131 aa18.54■□□□□ 0.56
C9orf3-215ENST00000478473 SVOPQ8N4V2 548 aa18.54■□□□□ 0.56
C9orf3-215ENST00000478473 OR10V1Q8NGI7 309 aa18.54■□□□□ 0.56
C9orf3-215ENST00000478473 RIMS4Q9H426 269 aaPredicted RBP18.54■□□□□ 0.56
C9orf3-215ENST00000478473 LIN7CQ9NUP9 197 aaKnown RBP18.54■□□□□ 0.56
C9orf3-215ENST00000478473 HSF4Q9ULV5 492 aa18.54■□□□□ 0.56
C9orf3-215ENST00000478473 PRKDCP78527 4128 aaKnown RBP18.54■□□□□ 0.56
C9orf3-215ENST00000478473 LDLRAD4O15165 306 aa18.53■□□□□ 0.56
C9orf3-215ENST00000478473 ATP6V1G2O95670 118 aa18.53■□□□□ 0.56
C9orf3-215ENST00000478473 ARSBP15848 533 aa18.53■□□□□ 0.56
C9orf3-215ENST00000478473 BLVRBP30043 206 aaPredicted RBP18.53■□□□□ 0.56
C9orf3-215ENST00000478473 PSMD7P51665 324 aa18.53■□□□□ 0.56
C9orf3-215ENST00000478473 SSX1Q16384 188 aa18.53■□□□□ 0.56
C9orf3-215ENST00000478473 ODF3L1Q8IXM7 274 aa18.53■□□□□ 0.56
C9orf3-215ENST00000478473 PRR18Q8N4B5 295 aa18.53■□□□□ 0.56
C9orf3-215ENST00000478473 Q8N9W7 124 aa18.53■□□□□ 0.56
C9orf3-215ENST00000478473 GALMQ96C23 342 aa18.53■□□□□ 0.56
C9orf3-215ENST00000478473 URM1Q9BTM9 101 aaKnown RBP18.53■□□□□ 0.56
C9orf3-215ENST00000478473 KCNK15Q9H427 330 aa18.53■□□□□ 0.56
C9orf3-215ENST00000478473 AK6Q9Y3D8 172 aaKnown RBP18.53■□□□□ 0.56
C9orf3-215ENST00000478473 G3V4G9 280 aa18.52■□□□□ 0.56
C9orf3-215ENST00000478473 MOSP00540 346 aa18.52■□□□□ 0.56
C9orf3-215ENST00000478473 GALP22466 123 aa18.52■□□□□ 0.56
C9orf3-215ENST00000478473 GABARAPL2P60520 117 aa18.52■□□□□ 0.56
C9orf3-215ENST00000478473 C9orf152Q5JTZ5 239 aa18.52■□□□□ 0.56
C9orf3-215ENST00000478473 C10orf99Q6UWK7 81 aa18.52■□□□□ 0.56
C9orf3-215ENST00000478473 MOB1BQ7L9L4 216 aa18.52■□□□□ 0.56
C9orf3-215ENST00000478473 OR52L2PQ8NGH6 319 aa18.52■□□□□ 0.56
C9orf3-215ENST00000478473 CHPT1Q8WUD6 406 aa18.52■□□□□ 0.56
C9orf3-215ENST00000478473 ABCG5Q9H222 651 aa18.52■□□□□ 0.56
C9orf3-215ENST00000478473 PLGRKTQ9HBL7 147 aa18.52■□□□□ 0.56
C9orf3-215ENST00000478473 IGHV3-72A0A0B4J1Y9 119 aa18.51■□□□□ 0.55
C9orf3-215ENST00000478473 TRAV1-2A0A0B4J238 106 aa18.51■□□□□ 0.55
C9orf3-215ENST00000478473 TCRBV4S1A1TA0A5B7 111 aa18.51■□□□□ 0.55
C9orf3-215ENST00000478473 RGS11O94810 467 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms