RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 Q8N976 141 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 OR4M1Q8NGD0 313 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 OR52P1PQ8NH57 321 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 MRPL48Q96GC5 212 aaKnown RBP2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 BTF3L4Q96K17 158 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 BMFQ96LC9 184 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 LINC00477Q96M19 166 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 OR2A7Q96R45 310 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 HSD17B10Q99714 261 aaKnown RBP2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 CMSS1Q9BQ75 279 aaKnown RBP2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 PARP12Q9H0J9 701 aaKnown RBP2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 NMNAT1Q9HAN9 279 aaPredicted RBP2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 C12orf10Q9HB07 376 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 PARP11Q9NR21 331 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 UBQLN4Q9NRR5 601 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 DOK5Q9P104 306 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 GLS2Q9UI32 602 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 POMPQ9Y244 141 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 PKIGQ9Y2B9 76 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 HDGFL3Q9Y3E1 203 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 FAM32AQ9Y421 112 aaKnown RBP2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 PIKFYVEQ9Y2I7 2098 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 CARMIL3Q8ND23 1372 aa2.33□□□□□ -2.04
SMARCA1-204ENST00000478420 DNMT1P26358 1616 aaKnown RBP2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 IGKV6-21A0A0C4DH24 114 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 OR4C46A6NHA9 309 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 ZNF705GA8MUZ8 300 aaPredicted RBP2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 EEF1E1-BLOC1S5C9J1V9 151 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 EEF1E1O43324 174 aaKnown RBP2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 OR7C1O76099 320 aaPredicted RBP2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 HBZP02008 142 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 OR4A8P0C604 315 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 OR5G3P0C626 314 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 CD79AP11912 226 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 OMGP23515 440 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 MPIP34949 423 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 MAP2K4P45985 399 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 GABRA4P48169 554 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 MARCKSL1P49006 195 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 DAD1P61803 113 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 HIST1H3AP68431 136 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 H3F3AP84243 136 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 PRDX4Q13162 271 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 APOFQ13790 326 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 PAFAH1B3Q15102 231 aaKnown RBP2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 ARHGAP11BQ3KRB8 267 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 N4BP2L1Q5TBK1 243 aaPredicted RBP2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 GLYATQ6IB77 296 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 LCN8Q6JVE9 175 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 Q6ZRU5 148 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 SHISA6Q6ZSJ9 500 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 HIST2H3AQ71DI3 136 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 ZNF550Q7Z398 422 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 MDP1Q86V88 176 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 DOLPP1Q86YN1 238 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 CYB561D1Q8N8Q1 229 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 OR10K1Q8NGX5 313 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 ZNRF2Q8NHG8 242 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 ABHD3Q8WU67 409 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 DYDC1Q8WWB3 177 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 PTX4Q96A99 478 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 SFRP2Q96HF1 295 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 DIRAS2Q96HU8 199 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 CHAC1Q9BUX1 264 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 TRIM4Q9C037 500 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 ZNF436Q9C0F3 470 aaPredicted RBP2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 C6orf62Q9GZU0 229 aaPredicted RBP2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 ABCG5Q9H222 651 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 PLEKHF2Q9H8W4 249 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 ENY2Q9NPA8 101 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 OPTCQ9UBM4 332 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 UFC1Q9Y3C8 167 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 MTUS2Q5JR59 1369 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 KIF15Q9NS87 1388 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 PIK3C2GO75747 1445 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 NCOA3Q9Y6Q9 1424 aa2.32□□□□□ -2.04
SMARCA1-204ENST00000478420 TRAV19A0A0A6YYK7 116 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 A0A0G2JMP0 313 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 EXOC1LA0A1B0GW35 172 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 PQLC2LA1A4F0 135 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 ZNF729A6NN14 1252 aaPredicted RBP2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 OR11H12B2RN74 326 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 FAAHO00519 579 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 ISLRO14498 428 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 BHLHE40O14503 412 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 TCF21O43680 179 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 S1PR2O95136 353 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 CYB5R3P00387 301 aaPredicted RBP2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 IFNA1P01562 189 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 OR4Q2P0C623 313 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 GADD45AP24522 165 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 ELK4P28324 431 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 RPS24P62847 133 aaKnown RBP2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 BTN3A2P78410 334 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 ERCC8Q13216 396 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 PMAIP1Q13794 54 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 JOSD1Q15040 202 aaPredicted RBP2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 SSX1Q16384 188 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 UBE2SQ16763 222 aa2.31□□□□□ -2.04
SMARCA1-204ENST00000478420 LINC00303Q3SY05 128 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms