RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 STOML2Q9UJZ1 356 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 SLC7A11Q9UPY5 501 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 ZNF443Q9Y2A4 671 aaPredicted RBP1.24□□□□□ -2.21
VPS50-213ENST00000477572 FAM32AQ9Y421 112 aaKnown RBP1.24□□□□□ -2.21
VPS50-213ENST00000477572 MYH3P11055 1940 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 NAV1Q8NEY1 1877 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 KDM5BQ9UGL1 1544 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 KIF1BO60333 1816 aa1.24□□□□□ -2.21
VPS50-213ENST00000477572 VIRMAQ69YN4 1812 aaKnown RBP1.24□□□□□ -2.21
VPS50-213ENST00000477572 NUP160Q12769 1436 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 ABCC11Q96J66 1382 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 MAP3K5Q99683 1374 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 KMT2EQ8IZD2 1858 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 GBF1Q92538 1859 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 A0A1W2PNM2 257 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 MYBPHLA2RUH7 354 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 GMNCA6NCL1 334 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 EFCAB10A6NFE3 127 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 LEUTXA8MZ59 168 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 K7EN84 100 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 K7EPK0 472 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 CCRL2O00421 344 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 ARPC5O15511 151 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 SGCEO43556 437 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 ZNF73O43830 326 aaPredicted RBP1.23□□□□□ -2.21
VPS50-213ENST00000477572 COX7A2P2O60397 106 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 NOS1APO75052 506 aaPredicted RBP1.23□□□□□ -2.21
VPS50-213ENST00000477572 SMIM24O75264 130 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 ZMPSTE24O75844 475 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 SNAP29O95721 258 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 LDOC1O95751 146 aaPredicted RBP1.23□□□□□ -2.21
VPS50-213ENST00000477572 SERPINA1P01009 418 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 CRHP06850 196 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 GUSBP08236 651 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 OR5AL1P0C617 328 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 PET100P0DJ07 73 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 ARL14EPLP0DKL9 152 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 LIPCP11150 499 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 TAC1P20366 129 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 IVDP26440 423 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 ELK4P28324 431 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 SLCO1A2P46721 670 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 TAS2R60P59551 318 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 AESQ08117 197 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 DYNC1I2Q13409 638 aaKnown RBP1.23□□□□□ -2.21
VPS50-213ENST00000477572 FLOT2Q14254 428 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 SMCO1Q147U7 214 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 TMED2Q15363 201 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 UBE2NLQ5JXB2 153 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 C5orf46Q6UWT4 87 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 LRRN1Q6UXK5 716 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 C4orf22Q6V702 233 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 Q6ZQT7 251 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 C3orf62Q6ZUJ4 267 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 LYG2Q86SG7 212 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 TMEM25Q86YD3 366 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 MSRB3Q8IXL7 192 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 ACBD4Q8NC06 268 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 OR5B17Q8NGF7 314 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 LGALS14Q8TCE9 139 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 DYNC2LI1Q8TCX1 351 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 RNASEH2CQ8TDP1 164 aaKnown RBP1.23□□□□□ -2.21
VPS50-213ENST00000477572 KCTD4Q8WVF5 259 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 TMEM239Q8WW34 195 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 IFT81Q8WYA0 676 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 MAFIPQ8WZ33 124 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 BORCS5Q969J3 196 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 CENPNQ96H22 339 aaPredicted RBP1.23□□□□□ -2.21
VPS50-213ENST00000477572 OLFM3Q96PB7 478 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 DCUN1D5Q9BTE7 237 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 ZNF426Q9BUY5 554 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 ULBP1Q9BZM6 244 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 PCBD2Q9H0N5 130 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 TXNIPQ9H3M7 391 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 TRABDQ9H4I3 376 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 KIR3DX1Q9H7L2 352 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 HRASLSQ9HDD0 168 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 IFT46Q9NQC8 304 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 PLEKHJ1Q9NW61 149 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 USE1Q9NZ43 259 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 MAT2BQ9NZL9 334 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 TFR2Q9UP52 801 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 SLC22A13Q9Y226 551 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 NDUFAF1Q9Y375 327 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 POLR3HQ9Y535 204 aaPredicted RBP1.23□□□□□ -2.21
VPS50-213ENST00000477572 FADS3Q9Y5Q0 445 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 SPEF2Q9C093 1822 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 CEP152O94986 1710 aa1.23□□□□□ -2.21
VPS50-213ENST00000477572 EIF3AQ14152 1382 aaKnown RBP1.22□□□□□ -2.21
VPS50-213ENST00000477572 CAMSAP1Q5T5Y3 1602 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 CCNB3Q8WWL7 1395 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 RAB3GAP2Q9H2M9 1393 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 PCF11O94913 1555 aaKnown RBP1.22□□□□□ -2.21
VPS50-213ENST00000477572 NRCAMQ92823 1304 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 TRAV8-7A0A075B6U6 113 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.22□□□□□ -2.21
VPS50-213ENST00000477572 A0A1B0GV90 55 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 SEC14L6B5MCN3 397 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 F5H5T6 163 aa1.22□□□□□ -2.21
VPS50-213ENST00000477572 F8W036 122 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms