RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 PSMG3Q9BT73 122 aaPredicted RBP11.53□□□□□ -0.56
DFFB-209ENST00000477548 PLEK2Q9NYT0 353 aa11.53□□□□□ -0.56
DFFB-209ENST00000477548 FREM2Q5SZK8 3169 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 IGHV3-20A0A0C4DH32 117 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 AHRRA9YTQ3 701 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 C2CD4DB7Z1M9 353 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 PDGFBP01127 241 aaPredicted RBP11.52□□□□□ -0.57
DFFB-209ENST00000477548 GYPAP02724 150 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 TYMSP04818 313 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 TCN2P20062 427 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 UCP1P25874 307 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 CLDN17P56750 224 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 SERF2P84101 59 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 TMEM211Q6ICI0 200 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 BATF2Q8N1L9 274 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 OR4F5Q8NH21 305 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 OR4F4Q96R69 305 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 KLRF1Q9NZS2 232 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 PAM16Q9Y3D7 125 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 IGKV1-12A0A0C4DH73 117 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 A0A0U1RQK1 487 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 ZNF320A2RRD8 509 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 J3KRW8 73 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 IGKV1D-12P01611 117 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 IAPPP10997 89 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 CHRNA7P36544 502 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 CDKN1BP46527 198 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 SUMO3P55854 103 aaPredicted RBP11.52□□□□□ -0.57
DFFB-209ENST00000477548 MRPL49Q13405 166 aaKnown RBP11.52□□□□□ -0.57
DFFB-209ENST00000477548 FAM78BQ5VT40 261 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 SHISA6Q6ZSJ9 500 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 CALHM1Q8IU99 346 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 OXGR1Q96P68 337 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 RAB40CQ96S21 281 aa11.52□□□□□ -0.57
DFFB-209ENST00000477548 CBY3A6NI87 242 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 NUPR1O60356 82 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 TFPI2P48307 235 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 TDRG1Q3Y452 100 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 SPTSSAQ969W0 71 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 PINX1Q96BK5 328 aaKnown RBP11.51□□□□□ -0.57
DFFB-209ENST00000477548 CCL28Q9NRJ3 127 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 ABCA7Q8IZY2 2146 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 ASXL3Q9C0F0 2248 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 TMEM250H0YL14 139 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 LILRA1O75019 489 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 TNFSF13O75888 250 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 IL3RAP26951 378 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 GCH1P30793 250 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 IZUMO4Q1ZYL8 232 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 RSPO1Q2MKA7 263 aaPredicted RBP11.51□□□□□ -0.57
DFFB-209ENST00000477548 ZNF525Q8N782 197 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 CMTM2Q8TAZ6 248 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 C20orf144Q9BQM9 153 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 FBRSQ9HAH7 460 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 DNAJC4Q9NNZ3 241 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 KIAA2026Q5HYC2 2103 aa11.51□□□□□ -0.57
DFFB-209ENST00000477548 NCOA6Q14686 2063 aaPredicted RBP11.5□□□□□ -0.57
DFFB-209ENST00000477548 IL6RP08887 468 aaPredicted RBP11.5□□□□□ -0.57
DFFB-209ENST00000477548 FBLP22087 321 aaKnown RBP11.5□□□□□ -0.57
DFFB-209ENST00000477548 HIST3H3Q16695 136 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 TMEM183BQ1AE95 376 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 COL5A1-AS1Q5SY13 56 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 LHFPL2Q6ZUX7 228 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 C11orf42Q8N5U0 333 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 GPR35Q9HC97 309 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 CHD3Q12873 2000 aaKnown RBP11.5□□□□□ -0.57
DFFB-209ENST00000477548 IGKV1D-13A0A0B4J2D9 117 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 A0A0G2JRQ6 117 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 IGKV1-13P0DP09 117 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 FOXL2P58012 376 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 HBG1P69891 147 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 HBG2P69892 147 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 ARL16Q0P5N6 197 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 RNF151Q2KHN1 245 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 LRRC75BQ2VPJ9 315 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 ACSF3Q4G176 576 aaPredicted RBP11.5□□□□□ -0.57
DFFB-209ENST00000477548 SMRP1Q8NCR6 262 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 OR5D13Q8NGL4 314 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 GPR146Q96CH1 333 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 IMMP2LQ96T52 175 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 VAMP8Q9BV40 100 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 MANBALQ9NQG1 85 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 TMEM106BQ9NUM4 274 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 PSENENQ9NZ42 101 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 CELSR3Q9NYQ7 3312 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 CABIN1Q9Y6J0 2220 aa11.5□□□□□ -0.57
DFFB-209ENST00000477548 A0A1W2PN81 502 aa11.49□□□□□ -0.57
DFFB-209ENST00000477548 IGHV4-34P06331 123 aa11.49□□□□□ -0.57
DFFB-209ENST00000477548 UMODP07911 640 aa11.49□□□□□ -0.57
DFFB-209ENST00000477548 CEACAM8P31997 349 aaPredicted RBP11.49□□□□□ -0.57
DFFB-209ENST00000477548 LCN2P80188 198 aa11.49□□□□□ -0.57
DFFB-209ENST00000477548 SHBQ15464 509 aa11.49□□□□□ -0.57
DFFB-209ENST00000477548 RAB30Q15771 203 aa11.49□□□□□ -0.57
DFFB-209ENST00000477548 LHFPL4Q7Z7J7 247 aa11.49□□□□□ -0.57
DFFB-209ENST00000477548 ZNF295-AS1Q8N0V1 137 aa11.49□□□□□ -0.57
DFFB-209ENST00000477548 ADPRHL1Q8NDY3 354 aa11.49□□□□□ -0.57
DFFB-209ENST00000477548 RASL10BQ96S79 203 aa11.49□□□□□ -0.57
DFFB-209ENST00000477548 RBM24Q9BX46 236 aaKnown RBP11.49□□□□□ -0.57
DFFB-209ENST00000477548 LNP1A1A4G5 178 aa11.49□□□□□ -0.57
DFFB-209ENST00000477548 SLC22A20A6NK97 555 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms