RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 PXT1Q8NFP0 134 aa7.43□□□□□ -1.22
COL4A5-204ENST00000477429 OR8H1Q8NGG4 311 aa7.43□□□□□ -1.22
COL4A5-204ENST00000477429 OR52M1Q8NGK5 317 aa7.43□□□□□ -1.22
COL4A5-204ENST00000477429 TNFAIP8L1Q8WVP5 186 aa7.43□□□□□ -1.22
COL4A5-204ENST00000477429 ORAI1Q96D31 301 aa7.43□□□□□ -1.22
COL4A5-204ENST00000477429 MS4A10Q96PG2 267 aa7.43□□□□□ -1.22
COL4A5-204ENST00000477429 FAM103A1Q9BTL3 118 aaKnown RBP7.43□□□□□ -1.22
COL4A5-204ENST00000477429 THTPAQ9BU02 230 aa7.43□□□□□ -1.22
COL4A5-204ENST00000477429 WFDC10AQ9H1F0 79 aa7.43□□□□□ -1.22
COL4A5-204ENST00000477429 RHOFQ9HBH0 211 aa7.43□□□□□ -1.22
COL4A5-204ENST00000477429 ARL2BPQ9Y2Y0 163 aa7.43□□□□□ -1.22
COL4A5-204ENST00000477429 A3GALT2U3KPV4 340 aa7.43□□□□□ -1.22
COL4A5-204ENST00000477429 TMEM30CPA0ZSE6 113 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 SULT1B1O43704 296 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 OCM2P0CE71 109 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 OCMP0CE72 109 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-204ENST00000477429 OR5H8P0DN80 308 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 DBTP11182 482 aaKnown RBP7.42□□□□□ -1.22
COL4A5-204ENST00000477429 RCC1P18754 421 aaPredicted RBP7.42□□□□□ -1.22
COL4A5-204ENST00000477429 GZMHP20718 246 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 OR3A3P47888 321 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 CX3CL1P78423 397 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 PITPNAQ00169 270 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 EWSR1Q01844 656 aaKnown RBP eCLIP7.42□□□□□ -1.22
COL4A5-204ENST00000477429 SATL1Q86VE3 508 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 OR52L2PQ8NGH6 319 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 OR4K15Q8NH41 348 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 C4orf36Q96KX1 117 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 CLUHP3Q96NS8 147 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 OR4C12Q96R67 309 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 CIB1Q99828 191 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 PDCD1LG2Q9BQ51 273 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 TMED9Q9BVK6 235 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 FBXL15Q9H469 300 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 IFT22Q9H7X7 185 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 KRT84Q9NSB2 600 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 FAM118AQ9NWS6 357 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 TAS2R4Q9NYW5 299 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 ST3GAL6Q9Y274 331 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 NUBP2Q9Y5Y2 271 aa7.42□□□□□ -1.22
COL4A5-204ENST00000477429 DMBT1Q9UGM3 2413 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-204ENST00000477429 ELOA3CA0A087WX78 387 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-204ENST00000477429 J3QLW9 94 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 SLC16A6O15403 523 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 NBR2O15453 112 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 LANCL1O43813 399 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 ORC5O43913 435 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 EIF4EBP3O60516 100 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-204ENST00000477429 NDUFA3O95167 84 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 TRBV12-3P01733 135 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 HBZP02008 142 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 HSPB1P04792 205 aaKnown RBP7.41□□□□□ -1.22
COL4A5-204ENST00000477429 HTR1AP08908 422 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 ZNF19P17023 458 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 CCR9P51686 369 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 CRIP2P52943 208 aaPredicted RBP7.41□□□□□ -1.22
COL4A5-204ENST00000477429 RBM11P57052 281 aaKnown RBP7.41□□□□□ -1.22
COL4A5-204ENST00000477429 ALKBH1Q13686 389 aaKnown RBP7.41□□□□□ -1.22
COL4A5-204ENST00000477429 LIN54Q6MZP7 749 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 FAM220AQ7Z4H9 259 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 SPATA24Q86W54 205 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 SGPP2Q8IWX5 399 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 PRR18Q8N4B5 295 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 PARP16Q8N5Y8 322 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 NPBQ8NG41 125 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 NRBF2Q96F24 287 aa7.41□□□□□ -1.22
COL4A5-204ENST00000477429 AIPO00170 330 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 RBMXL2O75526 392 aaKnown RBP7.4□□□□□ -1.22
COL4A5-204ENST00000477429 OR7C1O76099 320 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-204ENST00000477429 RGS11O94810 467 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 LY6G6CO95867 125 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 EDN2P20800 178 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 IL3RAP26951 378 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 ATP6V1E1P36543 226 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 PPP1CCP36873 323 aaKnown RBP7.4□□□□□ -1.22
COL4A5-204ENST00000477429 SOX2P48431 317 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 KCNJ3P48549 501 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 KLF5Q13887 457 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-204ENST00000477429 RSU1Q15404 277 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 MORN2Q502X0 79 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 ATAD3CQ5T2N8 411 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 OR52N1Q8NH53 320 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 DNAJC9Q8WXX5 260 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 CHCHD6Q9BRQ6 235 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 FAM192AQ9GZU8 254 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 PARP12Q9H0J9 701 aaKnown RBP7.4□□□□□ -1.22
COL4A5-204ENST00000477429 GHITMQ9H3K2 345 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 PLEKHA3Q9HB20 300 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 STUB1Q9UNE7 303 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 ING4Q9UNL4 249 aa7.4□□□□□ -1.22
COL4A5-204ENST00000477429 FOXA2Q9Y261 457 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-204ENST00000477429 PKHD1P08F94 4074 aa7.39□□□□□ -1.23
COL4A5-204ENST00000477429 DAPL1A0PJW8 107 aa7.39□□□□□ -1.23
COL4A5-204ENST00000477429 ANKRD34BA5PLL1 514 aa7.39□□□□□ -1.23
COL4A5-204ENST00000477429 DCTN3O75935 186 aa7.39□□□□□ -1.23
COL4A5-204ENST00000477429 CSN3P07498 182 aa7.39□□□□□ -1.23
COL4A5-204ENST00000477429 FSTP19883 344 aa7.39□□□□□ -1.23
COL4A5-204ENST00000477429 SERPINA2P20848 420 aa7.39□□□□□ -1.23
COL4A5-204ENST00000477429 MECP2P51608 486 aaKnown RBP7.39□□□□□ -1.23
COL4A5-204ENST00000477429 GTF2A1P52655 376 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms