RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 RPL29P47914 159 aaKnown RBP13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 PSMB3P49720 205 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 LRRC75BQ2VPJ9 315 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 SPIN3Q5JUX0 258 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 PRR18Q8N4B5 295 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 C17orf78Q8N4C9 275 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 ZNF525Q8N782 197 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 NECAP1Q8NC96 275 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 TMEM37Q8WXS4 190 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 ZCCHC14Q8WYQ9 949 aaKnown RBP13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 RSG1Q9BU20 258 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 TAAR3PQ9P1P4 343 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 IL17BQ9UHF5 180 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 IGLV3-32A0A0A0MS00 114 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 SOX15O60248 233 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 NPSP0C0P6 89 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 FKBP2P26885 142 aaKnown RBP13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 TNFSF10P50591 281 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 ENDOGQ14249 297 aaKnown RBP13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 C21orf62-AS1Q17RA5 79 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 DYRK2Q92630 601 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 TECTBQ96PL2 329 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 ZNF391Q9UJN7 358 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 LRRC3CA6NJW4 275 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 AQP7P3A6NL99 342 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 NTN3O00634 580 aaPredicted RBP13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 HPRT1P00492 218 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 WNT2P09544 360 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 ACP1P24666 158 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 FGF8P55075 233 aaPredicted RBP13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 RBM11P57052 281 aaKnown RBP13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 FBXW4P57775 412 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 TRA2AQ13595 282 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 ZNF705AQ6ZN79 300 aaPredicted RBP13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 MS4A10Q96PG2 267 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 LPAR2Q9HBW0 351 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 SLC7A10Q9NS82 523 aa13.07□□□□□ -0.32
CLSTN1-205ENST00000477264 SPEGQ15772 3267 aa13.06□□□□□ -0.32
CLSTN1-205ENST00000477264 WDR87Q6ZQQ6 2873 aa13.06□□□□□ -0.32
CLSTN1-205ENST00000477264 CTXN2P0C2S0 81 aa13.06□□□□□ -0.32
CLSTN1-205ENST00000477264 TMEM183BQ1AE95 376 aa13.06□□□□□ -0.32
CLSTN1-205ENST00000477264 PIGYQ3MUY2 71 aa13.06□□□□□ -0.32
CLSTN1-205ENST00000477264 RHBDD2Q6NTF9 364 aa13.06□□□□□ -0.32
CLSTN1-205ENST00000477264 TEX43Q6ZNM6 134 aa13.06□□□□□ -0.32
CLSTN1-205ENST00000477264 PARLQ9H300 379 aa13.06□□□□□ -0.32
CLSTN1-205ENST00000477264 ST3GAL6Q9Y274 331 aa13.06□□□□□ -0.32
CLSTN1-205ENST00000477264 SHANK1Q9Y566 2161 aa13.06□□□□□ -0.32
CLSTN1-205ENST00000477264 EFNA2O43921 213 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 SCRG1O75711 98 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 PAFAH1B2P68402 229 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 TMEM267Q0VDI3 215 aaPredicted RBP13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 ARSJQ5FYB0 599 aaPredicted RBP13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 ZNF818PQ6ZRF7 136 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 SSX7Q7RTT5 188 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 LHX4Q969G2 390 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 ZNF385AQ96PM9 386 aaKnown RBP13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 ZNF442Q9H7R0 627 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 SLC39A9Q9NUM3 307 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 IGKV1-27A0A075B6S5 117 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 LRP5LA4QPB2 252 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 ZNF705FA8MVS1 300 aaPredicted RBP13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 TUSC2O75896 110 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 GYPAP02724 150 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 ZNF705DP0CH99 300 aaPredicted RBP13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 ZNF705BP0CI00 300 aaPredicted RBP13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 BRS3P32247 399 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 PPP1CBP62140 327 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 GNB2P62879 340 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 TMEM42Q69YG0 159 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 C20orf196Q8IYI0 205 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 GAPTQ8N292 157 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 AGBL5Q8NDL9 886 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 POC1BQ8TC44 478 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 MRPL30Q8TCC3 161 aaKnown RBP13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 TMEM54Q969K7 222 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 TBX15Q96SF7 602 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 ELOVL1Q9BW60 279 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 VSIRQ9H7M9 311 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 GPR35Q9HC97 309 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 ZNF581Q9P0T4 197 aa13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 CHD3Q12873 2000 aaKnown RBP13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 ASCC3Q8N3C0 2202 aaKnown RBP13.05□□□□□ -0.32
CLSTN1-205ENST00000477264 LCATP04180 440 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 IL6RP08887 468 aaPredicted RBP13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 RPL15P61313 204 aaKnown RBP13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 ZNF295-AS1Q8N0V1 137 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 NABP1Q96AH0 204 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 RPUSD4Q96CM3 377 aaKnown RBP13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 WDR61Q9GZS3 305 aaKnown RBP13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 TMEM9BQ9NQ34 198 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 KIAA2026Q5HYC2 2103 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 SEC16AO15027 2179 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 KIR2DS1A0A191URI9 304 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 CDX4O14627 284 aaPredicted RBP13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 KIR2DS4P43632 304 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 FUT6P51993 359 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 IL11RAQ14626 422 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 KIR2DS1Q14954 304 aa13.04□□□□□ -0.32
CLSTN1-205ENST00000477264 RSPO1Q2MKA7 263 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms