RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ZCCHC24Q8N2G6 241 aaKnown RBP4.29□□□□□ -1.72
CCDC39-204ENST00000476379 D2HGDHQ8N465 521 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 OR1J1Q8NGS3 322 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 HIST1H2BAQ96A08 127 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 FAM131CQ96AQ9 280 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 WFDC1Q9HC57 220 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 RAB18Q9NP72 206 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 B4GALT7Q9UBV7 327 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 FUT9Q9Y231 359 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 TP53TG5Q9Y2B4 290 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 CBY1Q9Y3M2 126 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 TRAV38-1A0A0B4J264 116 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 A0A1B0GUS0 222 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 LOC102725191A0A1B0GVB3 256 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 C9orf172C9J069 976 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 FCGR3BO75015 233 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 CELA3BP08861 270 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 CD200P41217 278 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 TLE4Q04727 773 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF266Q14584 549 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 FAM122AQ96E09 287 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 SPIN2AQ99865 258 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 SPIN2BQ9BPZ2 258 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 TWSG1Q9GZX9 223 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 GAR1Q9NY12 217 aaKnown RBP4.29□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF391Q9UJN7 358 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 OR6C6A6NF89 314 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 RBFOX3A6NFN3 312 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 MPPED1O15442 326 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 TGOLN2O43493 480 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 SLC25A6P12236 298 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 NDUFB7P17568 137 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 PMCHP20382 165 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 FGF7P21781 194 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 EIF1P41567 113 aaKnown RBP4.29□□□□□ -1.72
CCDC39-204ENST00000476379 HOXA1P49639 335 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-204ENST00000476379 OR1C1Q15619 314 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 TEX30Q5JUR7 227 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-204ENST00000476379 PRAMEF5Q5TYX0 476 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 FAM78BQ5VT40 261 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 ATOH7Q8N100 152 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 SCCPDHQ8NBX0 429 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 OR52L2PQ8NGH6 319 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 ZDHHC16Q969W1 377 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 SLC25A31Q9H0C2 315 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 SLC35B3Q9H1N7 401 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 LIME1Q9H400 295 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 PPP1R14DQ9NXH3 145 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 HS3ST3B1Q9Y662 390 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 CEP192Q8TEP8 1941 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 IGKV1-27A0A075B6S5 117 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 IGKV1-12A0A0C4DH73 117 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 IGSF23A1L1A6 192 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 SERPINE3A8MV23 424 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 EIF1BO60739 113 aaKnown RBP4.29□□□□□ -1.72
CCDC39-204ENST00000476379 IGKV1D-12P01611 117 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 CLPSP04118 112 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 CD63P08962 238 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 OTX1P32242 354 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-204ENST00000476379 RND3P61587 244 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 ROM1Q03395 351 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 SURF2Q15527 256 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-204ENST00000476379 OR8B8Q15620 311 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 FAM189A2Q15884 450 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 TMEM41BQ5BJD5 291 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 GCSAMLQ5JQS6 135 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 SPNS3Q6ZMD2 512 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 IL34Q6ZMJ4 242 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 OR2Z1Q8NG97 314 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 OR51G1Q8NGK1 321 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 OR13D1Q8NGV5 346 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 GPX7Q96SL4 187 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-204ENST00000476379 ENY2Q9NPA8 101 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 CRIM1Q9NZV1 1036 aa4.29□□□□□ -1.72
CCDC39-204ENST00000476379 DENND4AQ7Z401 1863 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 MAP1LC3B2A6NCE7 125 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 VSTM5A8MXK1 200 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 FTCDNL1E5RQL4 147 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 PPP5D1E7EU14 171 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 PAGE4O60829 102 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 PDCD6O75340 191 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 CLN5O75503 358 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 CD74P04233 296 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF83P51522 516 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 ERVFRD-1P60508 538 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 KRTDAPP60985 99 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 LIAT1Q6ZQX7 453 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 BAGE3Q86Y29 109 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 BAGE2Q86Y30 109 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 TMEM252Q8N6L7 170 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 OR2V1Q8NHB1 315 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 FAM210BQ96KR6 192 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 DUSP23Q9BVJ7 150 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 MAP1LC3BQ9GZQ8 125 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 DLL3Q9NYJ7 618 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 TECRQ9NZ01 308 aaKnown RBP4.28□□□□□ -1.72
CCDC39-204ENST00000476379 IGHV3-72A0A0B4J1Y9 119 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 TMEM14DPA8MWL7 114 aa4.28□□□□□ -1.72
CCDC39-204ENST00000476379 MFNGO00587 321 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms