RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MGMTP16455 207 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 MYL12AP19105 171 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 CELP19835 753 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 FUT3P21217 361 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 CNTFRP26992 372 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 PSMB8P28062 276 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 PPIFP30405 207 aaKnown RBP5.48□□□□□ -1.53
HDAC3-207ENST00000475549 SLC6A1P30531 599 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 CDX1P47902 265 aaPredicted RBP5.48□□□□□ -1.53
HDAC3-207ENST00000475549 SLC35B1P78383 322 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 FOXE3Q13461 319 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 GPR50Q13585 617 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 GPR176Q14439 515 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 KIR2DS1Q14954 304 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 NKAPLQ5M9Q1 402 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 C6orf141Q5SZD1 244 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 FAM27D1Q5T7N8 215 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 ASPHD1Q5U4P2 390 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 STEAP3Q658P3 488 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 CDH26Q8IXH8 852 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 PRR18Q8N4B5 295 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 JAGN1Q8N5M9 183 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 OR51D1Q8NGF3 324 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 MYOZ3Q8TDC0 251 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 FAM46BQ96A09 425 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 MRPS24Q96EL2 167 aaKnown RBP5.48□□□□□ -1.53
HDAC3-207ENST00000475549 Q96M66 194 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 S100A13Q99584 98 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 B9D2Q9BPU9 175 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 SELENOIQ9C0D9 397 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 TAF9BQ9HBM6 251 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 OR2S2Q9NQN1 319 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 MBNL3Q9NUK0 354 aaKnown RBP5.48□□□□□ -1.53
HDAC3-207ENST00000475549 FKBP14Q9NWM8 211 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 GNG12Q9UBI6 72 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 ZNF107Q9UII5 783 aaPredicted RBP5.48□□□□□ -1.53
HDAC3-207ENST00000475549 TRAPPC2LQ9UL33 140 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 LSM4Q9Y4Z0 139 aaKnown RBP5.48□□□□□ -1.53
HDAC3-207ENST00000475549 IRGMA1A4Y4 181 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 FAM90A10PA6NDY2 464 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 EFCAB10A6NFE3 127 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 FAM90A7PA6NKC0 464 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 FAM90A23PA8MXZ1 464 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 G3V318 75 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 SPINT2O43291 252 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 LANCL1O43813 399 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 CRTAPO75718 401 aaPredicted RBP5.47□□□□□ -1.53
HDAC3-207ENST00000475549 IGLV1-40P01703 118 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 IGHG4P01861 327 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 CD1AP06126 327 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 ELANEP08246 267 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 CD37P11049 281 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 SLC2A2P11168 524 aaPredicted RBP5.47□□□□□ -1.53
HDAC3-207ENST00000475549 HTR2CP28335 458 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 SOX6P35712 828 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 PPP1CCP36873 323 aaKnown RBP5.47□□□□□ -1.53
HDAC3-207ENST00000475549 CAPGP40121 348 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 OR3A3P47888 321 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 QRFPP83859 136 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 DGCR2P98153 550 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 LSAMPQ13449 338 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 FHL3Q13643 280 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 TTC23Q5W5X9 447 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 AWAT2Q6E213 333 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 OR10K2Q6IF99 312 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 UNQ9370/PRO34162Q6UXP9 181 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 LRRTM1Q86UE6 522 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 STX19Q8N4C7 294 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 DHRSXQ8N5I4 330 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 NANOGP1Q8N7R0 232 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 OR8H1Q8NGG4 311 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 TFAP2CQ92754 450 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 KCTD7Q96MP8 289 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 RASL11BQ9BPW5 248 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 SULT4A1Q9BR01 284 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 ZNF251Q9BRH9 671 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 FAAP24Q9BTP7 215 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 MCRIP2Q9BUT9 160 aaKnown RBP5.47□□□□□ -1.53
HDAC3-207ENST00000475549 KCNK15Q9H427 330 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 SPACA1Q9HBV2 294 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 PLCXD1Q9NUJ7 323 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 CKLFQ9UBR5 152 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 WSB1Q9Y6I7 421 aa5.47□□□□□ -1.53
HDAC3-207ENST00000475549 A0A0A6YYD4 124 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 IGHV7-81A0A0B4J1V7 117 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 I3L521 148 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 EBAG9O00559 213 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 FCN1O00602 326 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 SOX15O60248 233 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 PDCD6O75340 191 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 PROP1O75360 226 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 CA11O75493 328 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 GLAP06280 429 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 EGR2P11161 476 aaPredicted RBP5.46□□□□□ -1.54
HDAC3-207ENST00000475549 IL3RAP26951 378 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 CHATP28329 748 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 WNT4P56705 351 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 RAB25P57735 213 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 LINC00205P59089 165 aa5.46□□□□□ -1.54
HDAC3-207ENST00000475549 ACTBP60709 375 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms