RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 COL13A1Q5TAT6 717 aaPredicted RBP9.56□□□□□ -0.88
VAPB-204ENST00000475243 RTN4RQ9BZR6 473 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 GREB1Q4ZG55 1949 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 OR4C45A6NMZ5 311 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 STPG1Q5TH74 334 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 TRIOBPQ9H2D6 2365 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 IGSF23A1L1A6 192 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 EWSR1Q01844 656 aaKnown RBP eCLIP9.55□□□□□ -0.88
VAPB-204ENST00000475243 TWIST1Q15672 202 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 HLA-DRB5Q30154 266 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 GPA33Q99795 319 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 SHANK3Q9BYB0 1731 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 DOCK10Q96BY6 2186 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 PPIAL4EA0A075B759 164 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 PPIAL4DF5H284 164 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 IGHV4-34P06331 123 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 CRHP06850 196 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 PPIAL4FP0DN26 164 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 PLPPR5Q32ZL2 321 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 WDR73Q6P4I2 378 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 OR1L8Q8NGR8 309 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 OR2V2Q96R30 315 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 VAX2Q9UIW0 290 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 FUT9Q9Y231 359 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 PPIAL4AQ9Y536 164 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 FANCMQ8IYD8 2048 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 OR4C46A6NHA9 309 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 RIGQ13278 110 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 KIAA2026Q5HYC2 2103 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 C10orf35Q96D05 121 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 CA10Q9NS85 328 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 CADP27708 2225 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 C5orf67F2Z3F1 127 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 J3QT63 122 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 IER3P46695 156 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 SPANXN1Q5VSR9 72 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 PERPQ96FX8 193 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 MIXL1Q9H2W2 232 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 PRNDQ9UKY0 176 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 ANKRD55Q3KP44 614 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 NEU3Q9UQ49 428 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 V9GYH0 126 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 A0A0J9YW62 118 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 C1orf185Q5T7R7 199 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 TEPPQ6URK8 271 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 ZNF519Q8TB69 540 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 ST6GAL2Q96JF0 529 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 IL17BQ9UHF5 180 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 MFSD2BA6NFX1 497 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 CTDSPLO15194 276 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 MBPP02686 304 aaPredicted RBP9.55□□□□□ -0.88
VAPB-204ENST00000475243 VSIG8P0DPA2 414 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 AREGP15514 252 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 SRSF9Q13242 221 aaKnown RBP eCLIP9.55□□□□□ -0.88
VAPB-204ENST00000475243 CLEC2AQ6UVW9 174 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 SLC16A13Q7RTY0 426 aa9.55□□□□□ -0.88
VAPB-204ENST00000475243 RPL36A-HNRNPH2H7BZ11 118 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 PRSS23O95084 383 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 RCC1P18754 421 aaPredicted RBP9.54□□□□□ -0.88
VAPB-204ENST00000475243 C1orf53Q5VUE5 145 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 RFLNBQ8N5W9 214 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 MYOZ3Q8TDC0 251 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 SNRNP40Q96DI7 357 aaKnown RBP9.54□□□□□ -0.88
VAPB-204ENST00000475243 Q9N2K0 584 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 TGIF1Q15583 401 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 IGSF11Q5DX21 431 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 OVCH2Q7RTZ1 564 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 PHYHIPLQ96FC7 376 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 GPX7Q96SL4 187 aaPredicted RBP9.54□□□□□ -0.88
VAPB-204ENST00000475243 BET1LQ9NYM9 111 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 CCL27Q9Y4X3 112 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 THADAQ6YHU6 1953 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 DOCK9Q9BZ29 2069 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 ADAM11O75078 769 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 KHDC3LQ587J8 217 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 SLC25A53Q5H9E4 307 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 ANAPC16Q96DE5 110 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 SULT1A2P50226 295 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 CBLN2Q8IUK8 224 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 BVESQ8NE79 360 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 CHST5Q9GZS9 411 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 RAB33BQ9H082 229 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 WIPI2Q9Y4P8 454 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 RAB29O14966 203 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 ZFP36L2P47974 494 aaKnown RBP9.54□□□□□ -0.88
VAPB-204ENST00000475243 UCP2P55851 309 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 PSG4Q00888 419 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 ROM1Q03395 351 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 LGALSLQ3ZCW2 172 aaPredicted RBP9.54□□□□□ -0.88
VAPB-204ENST00000475243 HCP5Q6MZN7 132 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 ZNF826PQ6ZT77 177 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 TMEM210A6NLX4 147 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 ZNF207O43670 478 aaKnown RBP9.54□□□□□ -0.88
VAPB-204ENST00000475243 HIST1H1EP10412 219 aaKnown RBP9.54□□□□□ -0.88
VAPB-204ENST00000475243 NANOS3P60323 173 aaKnown RBP9.54□□□□□ -0.88
VAPB-204ENST00000475243 ISXQ2M1V0 245 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 FAM216AQ8WUB2 273 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 FGF11Q92914 225 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 GPHA2Q96T91 129 aa9.54□□□□□ -0.88
VAPB-204ENST00000475243 K7N7A8 449 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms