RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CLRN1P58418 232 aa4.14□□□□□ -1.75
NPHP3-206ENST00000474871 FAM3BP58499 235 aaPredicted RBP4.14□□□□□ -1.75
NPHP3-206ENST00000474871 EIF3IQ13347 325 aaKnown RBP4.14□□□□□ -1.75
NPHP3-206ENST00000474871 ARFRP1Q13795 201 aa4.14□□□□□ -1.75
NPHP3-206ENST00000474871 FAM53BQ14153 422 aa4.14□□□□□ -1.75
NPHP3-206ENST00000474871 IHHQ14623 411 aa4.14□□□□□ -1.75
NPHP3-206ENST00000474871 SLC18B1Q6NT16 456 aa4.14□□□□□ -1.75
NPHP3-206ENST00000474871 CMC1Q7Z7K0 106 aa4.14□□□□□ -1.75
NPHP3-206ENST00000474871 IQCF1Q8N6M8 205 aa4.14□□□□□ -1.75
NPHP3-206ENST00000474871 OR6K6Q8NGW6 343 aa4.14□□□□□ -1.75
NPHP3-206ENST00000474871 SEC22AQ96IW7 307 aa4.14□□□□□ -1.75
NPHP3-206ENST00000474871 Q96MF0 132 aa4.14□□□□□ -1.75
NPHP3-206ENST00000474871 PSMG3Q9BT73 122 aaPredicted RBP4.14□□□□□ -1.75
NPHP3-206ENST00000474871 ZFAND3Q9H8U3 227 aa4.14□□□□□ -1.75
NPHP3-206ENST00000474871 A0A0D9SEW6 157 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 PSMB11A5LHX3 300 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 PRRG2O14669 202 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 ARL6IP5O75915 188 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 OR12D1P0DN82 309 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 ATF1P18846 271 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 ATP6V0CP27449 155 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 GABRA3P34903 492 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 P2RX1P51575 399 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 RND2P52198 227 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 GNB2P62879 340 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 ID3Q02535 119 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 ABCA11PQ4W5N1 156 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 TCTEX1D1Q8N7M0 179 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 OR1J4Q8NGS1 313 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 POLR2J3Q9H1A7 115 aaKnown RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 EMC9Q9Y3B6 208 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 LINC01553A4QN01 128 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 TEX22C9J3V5 150 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 GEMIN2O14893 280 aaKnown RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 DEGS1O15121 323 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 PMS2P2O95744 297 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 HLA-AP01891 365 aaKnown RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 HIST1H1CP16403 213 aaKnown RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 TMEM50BP56557 158 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 PCBP4P57723 403 aaKnown RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 OR52I1Q8NGK6 324 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 OR52I2Q8NH67 350 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 ADTRPQ96IZ2 230 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 GABRG3Q99928 467 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 PYGO2Q9BRQ0 406 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 SLC25A33Q9BSK2 321 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 PECRQ9BY49 303 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 SERTAD4Q9NUC0 356 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 SLC2A6Q9UGQ3 507 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 NTNG1Q9Y2I2 539 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 RPL36Q9Y3U8 105 aaKnown RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 NUP210Q8TEM1 1887 aaPredicted RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 TEX48A0A1B0GUV7 120 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 SHISA3A0PJX4 238 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 J3QL48 77 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 XRCC3O43542 346 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 CSN3P07498 182 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 CELA3BP08861 270 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 HOXD9P28356 352 aaPredicted RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 PPM1JQ5JR12 505 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 ZNF626Q68DY1 528 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 HIST2H2BCQ6DN03 193 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 HIST2H2BDQ6DRA6 164 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 TNFAIP8L2Q6P589 184 aaPredicted RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 ZNF841Q6ZN19 808 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 PPP1R32Q7Z5V6 425 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 ZNF808Q8N4W9 903 aaPredicted RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 PROKR1Q8TCW9 393 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 FAM131CQ96AQ9 280 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 ELSPBP1Q96BH3 223 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 ZNF649Q9BS31 505 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 MAGIXQ9H6Y5 334 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 PELI2Q9HAT8 420 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 RPS10P5Q9NQ39 176 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 FLRT3Q9NZU0 649 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 MDFICQ9P1T7 246 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 LOC285095A0A1B0GVY8 99 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 DAPL1A0PJW8 107 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 GAPDHSO14556 408 aaPredicted RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 H1F0P07305 194 aaKnown RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 CPMP14384 443 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 AQP1P29972 269 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 SDC2P34741 201 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 CCL11P51671 97 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 ATP1B3P54709 279 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 POU3F1Q03052 451 aaPredicted RBP4.13□□□□□ -1.75
NPHP3-206ENST00000474871 COL10A1Q03692 680 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 CRB2Q5IJ48 1285 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 C8orf86Q6ZUL3 223 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 NR2C2APQ86WQ0 139 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 TMEFF1Q8IYR6 380 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 OR5AN1Q8NGI8 311 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 OR10G7Q8NGN6 311 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 OR4C13Q8NGP0 309 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 DDIT4LQ96D03 193 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 OR51I1Q9H343 314 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 IL21Q9HBE4 155 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 HEBP1Q9NRV9 189 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 SIGLEC8Q9NYZ4 499 aa4.13□□□□□ -1.75
NPHP3-206ENST00000474871 PEMTQ9UBM1 199 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms