RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 SDCBPO00560 298 aaPredicted RBP13.67□□□□□ -0.22
SCAF11-206ENST00000474828 ITGB1BP1O14713 200 aa13.67□□□□□ -0.22
SCAF11-206ENST00000474828 YPEL1O60688 119 aa13.67□□□□□ -0.22
SCAF11-206ENST00000474828 DTYMKP23919 212 aa13.67□□□□□ -0.22
SCAF11-206ENST00000474828 NFYBP25208 207 aa13.67□□□□□ -0.22
SCAF11-206ENST00000474828 RORCP51449 518 aa13.67□□□□□ -0.22
SCAF11-206ENST00000474828 PNLIPRP3Q17RR3 467 aa13.67□□□□□ -0.22
SCAF11-206ENST00000474828 CDNFQ49AH0 187 aa13.67□□□□□ -0.22
SCAF11-206ENST00000474828 MORN2Q502X0 79 aa13.67□□□□□ -0.22
SCAF11-206ENST00000474828 SLC25A48Q6ZT89 311 aaKnown RBP13.67□□□□□ -0.22
SCAF11-206ENST00000474828 CLVS1Q8IUQ0 354 aaPredicted RBP13.67□□□□□ -0.22
SCAF11-206ENST00000474828 GALMQ96C23 342 aa13.67□□□□□ -0.22
SCAF11-206ENST00000474828 YPEL2Q96QA6 119 aa13.67□□□□□ -0.22
SCAF11-206ENST00000474828 RBM38Q9H0Z9 239 aaKnown RBP13.67□□□□□ -0.22
SCAF11-206ENST00000474828 CEPT1Q9Y6K0 416 aa13.67□□□□□ -0.22
SCAF11-206ENST00000474828 RNF212BA8MTL3 300 aa13.66□□□□□ -0.22
SCAF11-206ENST00000474828 FCGR3AP08637 254 aa13.66□□□□□ -0.22
SCAF11-206ENST00000474828 ZNF134P52741 427 aa13.66□□□□□ -0.22
SCAF11-206ENST00000474828 HLA-DRB3P79483 266 aa13.66□□□□□ -0.22
SCAF11-206ENST00000474828 SRSF2Q01130 221 aaKnown RBP13.66□□□□□ -0.22
SCAF11-206ENST00000474828 HABP2Q14520 560 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-206ENST00000474828 SPCS2Q15005 226 aa13.66□□□□□ -0.22
SCAF11-206ENST00000474828 LRRC75BQ2VPJ9 315 aa13.66□□□□□ -0.22
SCAF11-206ENST00000474828 UBE2NLQ5JXB2 153 aa13.66□□□□□ -0.22
SCAF11-206ENST00000474828 TPTE2P1Q5T6R2 138 aa13.66□□□□□ -0.22
SCAF11-206ENST00000474828 C16orf87Q6PH81 154 aa13.66□□□□□ -0.22
SCAF11-206ENST00000474828 C5orf24Q7Z6I8 188 aa13.66□□□□□ -0.22
SCAF11-206ENST00000474828 CHIAQ9BZP6 476 aa13.66□□□□□ -0.22
SCAF11-206ENST00000474828 VPREB3Q9UKI3 123 aa13.66□□□□□ -0.22
SCAF11-206ENST00000474828 AMMECR1Q9Y4X0 333 aaPredicted RBP13.66□□□□□ -0.22
SCAF11-206ENST00000474828 FAM172BPA6NC97 362 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 TRDCB7Z8K6 153 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 TOR1AO14656 332 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 XRCC3O43542 346 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 APOA1P02647 267 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 CD3GP09693 182 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 ZNF182P17025 639 aaPredicted RBP13.65□□□□□ -0.22
SCAF11-206ENST00000474828 CEACAM3P40198 252 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 PITPNAQ00169 270 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 SSX2Q16385 188 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 CT45A1Q5HYN5 189 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 FAM53AQ6NSI3 398 aaPredicted RBP13.65□□□□□ -0.22
SCAF11-206ENST00000474828 CT45A3Q8NHU0 189 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 UBALD1Q8TB05 177 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 DYNC2LI1Q8TCX1 351 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 LEAP2Q969E1 77 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 SSX3Q99909 188 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 OR2S2Q9NQN1 319 aa13.65□□□□□ -0.22
SCAF11-206ENST00000474828 ELF5Q9UKW6 265 aaPredicted RBP13.65□□□□□ -0.22
SCAF11-206ENST00000474828 IGKV1-6A0A0C4DH72 117 aa13.64□□□□□ -0.23
SCAF11-206ENST00000474828 TMEM89A2RUT3 159 aa13.64□□□□□ -0.23
SCAF11-206ENST00000474828 FAM90A9PA6NNJ1 464 aa13.64□□□□□ -0.23
SCAF11-206ENST00000474828 H3BMQ9 156 aa13.64□□□□□ -0.23
SCAF11-206ENST00000474828 SSX5O60225 188 aa13.64□□□□□ -0.23
SCAF11-206ENST00000474828 COMPP49747 757 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-206ENST00000474828 ZNF816Q0VGE8 651 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-206ENST00000474828 MADCAM1Q13477 382 aa13.64□□□□□ -0.23
SCAF11-206ENST00000474828 LIAT1Q6ZQX7 453 aa13.64□□□□□ -0.23
SCAF11-206ENST00000474828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-206ENST00000474828 OR4A4PQ8NGN8 299 aa13.64□□□□□ -0.23
SCAF11-206ENST00000474828 ISOC1Q96CN7 298 aa13.64□□□□□ -0.23
SCAF11-206ENST00000474828 S100A16Q96FQ6 103 aaKnown RBP13.64□□□□□ -0.23
SCAF11-206ENST00000474828 CABLES2Q9BTV7 478 aa13.64□□□□□ -0.23
SCAF11-206ENST00000474828 AUNIPQ9H7T9 357 aa13.64□□□□□ -0.23
SCAF11-206ENST00000474828 CHMP1AQ9HD42 196 aaPredicted RBP13.64□□□□□ -0.23
SCAF11-206ENST00000474828 DIABLOQ9NR28 239 aa13.64□□□□□ -0.23
SCAF11-206ENST00000474828 IGHV3-43A0A0B4J1X8 118 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 TMEM235A6NFC5 223 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 ZNF701M0R085 212 aaPredicted RBP13.63□□□□□ -0.23
SCAF11-206ENST00000474828 SCTP09683 121 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 IGHV3-43DP0DP04 118 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 HKR1P10072 659 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 PAX6P26367 422 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 KIR2DS4P43632 304 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 GNMTQ14749 295 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 KIR2DS1Q14954 304 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 HERPUD1Q15011 391 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 LTC4SQ16873 150 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 LCE2DQ5TA82 110 aaPredicted RBP13.63□□□□□ -0.23
SCAF11-206ENST00000474828 SAMD12Q8N8I0 201 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 OR52L2PQ8NGH6 319 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 AP3S1Q92572 193 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 DUX5Q96PT3 197 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 AGMATQ9BSE5 352 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 C19orf24Q9BVV8 132 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 GNG12Q9UBI6 72 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 ANK2Q01484 3957 aa13.63□□□□□ -0.23
SCAF11-206ENST00000474828 TRAV18A0A075B6X5 111 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 A0A1W2PPI3 338 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 A6NDX4 124 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 H3BUX3 64 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 SLC31A2O15432 143 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 GPR137BO60478 399 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 RGS11O94810 467 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 TPPPO94811 219 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 MNDAP41218 407 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 RAB7AP51149 207 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 CCDC144NLQ6NUI1 221 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 THNSL2Q86YJ6 484 aa13.62□□□□□ -0.23
SCAF11-206ENST00000474828 ODF3L1Q8IXM7 274 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms