RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 MMP23AO75900 390 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 AMBPP02760 352 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 OPN1LWP04000 364 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 RPLP1P05386 114 aaKnown RBP6.91□□□□□ -1.3
CCDC93-208ENST00000474546 IGHV4-34P06331 123 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 PFN1P07737 140 aaKnown RBP6.91□□□□□ -1.3
CCDC93-208ENST00000474546 COX5AP20674 150 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 F2RP25116 425 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 CEBPGP53567 150 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 PPP1CAP62136 330 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 CCL7P80098 99 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 TGIF1Q15583 401 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 HYAL4Q2M3T9 481 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 LRRC75BQ2VPJ9 315 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 SPIN3Q5JUX0 258 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 ACTL10Q5JWF8 245 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 DCAF10Q5QP82 559 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 ABLIM2Q6H8Q1 611 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 MEX3BQ6ZN04 569 aaKnown RBP6.91□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF66Q6ZN08 573 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 RPS19BP1Q86WX3 136 aaKnown RBP6.91□□□□□ -1.3
CCDC93-208ENST00000474546 MRPL41Q8IXM3 137 aaKnown RBP6.91□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF321PQ8N8H1 164 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF709Q8N972 641 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 FADS6Q8N9I5 356 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 OR2M3Q8NG83 312 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 OR51G1Q8NGK1 321 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 OR5D18Q8NGL1 313 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 OR4X1Q8NH49 305 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 OR1F12Q8NHA8 337 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 ABHD5Q8WTS1 349 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 CA5BP1Q8WTZ4 195 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 KCNE4Q8WWG9 221 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 REEP6Q96HR9 211 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 SNX22Q96L94 193 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 RPP25Q9BUL9 199 aaKnown RBP6.91□□□□□ -1.3
CCDC93-208ENST00000474546 ULBP2Q9BZM5 246 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 RTN4RQ9BZR6 473 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 GPR173Q9NS66 373 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 OR14J1Q9UGF5 321 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 ATP23Q9Y6H3 246 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 URGCP-MRPS24S4R325 110 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 IGHV5-51A0A0C4DH38 117 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 KIR2DL5BA0A0G2JN68 375 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 KIR2DL5BA0A0G2JPC4 375 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 A0A1W2PP11 408 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 CD300LBA8K4G0 201 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 H3BML4 177 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 ADAM20O43506 726 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 SYNGR2O43760 224 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 CHST1O43916 411 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 MPDU1O75352 247 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF737O75373 536 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 COX5BP10606 129 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 GABRG2P18507 467 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 CRYGSP22914 178 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 CD27P26842 260 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 CNN1P51911 297 aaKnown RBP6.9□□□□□ -1.3
CCDC93-208ENST00000474546 UCNP55089 124 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 CLDN17P56750 224 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 TPPP2P59282 170 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 RPP30P78346 268 aaKnown RBP6.9□□□□□ -1.3
CCDC93-208ENST00000474546 PAX5Q02548 391 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF92Q03936 586 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 TNFRSF9Q07011 255 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 FOXL1Q12952 345 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 TMEM183BQ1AE95 376 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 KRTAP27-1Q3LI81 207 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 SP6Q3SY56 376 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 WDR25Q64LD2 544 aaPredicted RBP6.9□□□□□ -1.3
CCDC93-208ENST00000474546 CYB5R2Q6BCY4 276 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 TOMM20LQ6UXN7 152 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.9□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF761Q86XN6 746 aaPredicted RBP6.9□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF573Q86YE8 665 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 THNSL2Q86YJ6 484 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 KIR2DL5AQ8N109 375 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 WDR31Q8NA23 367 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 DNASE2BQ8WZ79 361 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 LHX4Q969G2 390 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 SPSB4Q96A44 273 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF524Q96C55 264 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 NEIL1Q96FI4 390 aaPredicted RBP6.9□□□□□ -1.3
CCDC93-208ENST00000474546 LYZL4Q96KX0 146 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 WFIKKN1Q96NZ8 548 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 SIGLEC12Q96PQ1 595 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 HIST1H2AAQ96QV6 131 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 TP53RKQ96S44 253 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 C20orf144Q9BQM9 153 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 EMC6Q9BV81 110 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 PRDM14Q9GZV8 571 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 CRLF2Q9HC73 371 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 FKBP11Q9NYL4 201 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 RNF115Q9Y4L5 304 aa6.9□□□□□ -1.3
CCDC93-208ENST00000474546 PI4KAP42356 2102 aa6.89□□□□□ -1.31
CCDC93-208ENST00000474546 IGKV1D-8A0A087WSZ0 117 aa6.89□□□□□ -1.31
CCDC93-208ENST00000474546 ZFP92A6NM28 416 aa6.89□□□□□ -1.31
CCDC93-208ENST00000474546 CEBPZOSA8MTT3 80 aa6.89□□□□□ -1.31
CCDC93-208ENST00000474546 ZNF705GA8MUZ8 300 aaPredicted RBP6.89□□□□□ -1.31
CCDC93-208ENST00000474546 B4E171 279 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms