RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 RRP9O43818 475 aaKnown RBP16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 MYCNOSP40205 109 aa16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 CT45A1Q5HYN5 189 aa16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 RNLSQ5VYX0 342 aa16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 ETV3LQ6ZN32 361 aa16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 KLHL30-AS1Q8NEE0 82 aa16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 OR10V1Q8NGI7 309 aa16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 CT45A3Q8NHU0 189 aa16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 TFAP2CQ92754 450 aa16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 S1PR3Q99500 378 aa16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 MND1Q9BWT6 205 aa16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 TAF9BQ9HBM6 251 aa16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 OR2S2Q9NQN1 319 aa16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 MBNL3Q9NUK0 354 aaKnown RBP16.05■□□□□ 0.16
PDLIM4-206ENST00000474421 UBE2QL1A1L167 161 aa16.04■□□□□ 0.16
PDLIM4-206ENST00000474421 LANCL1O43813 399 aa16.04■□□□□ 0.16
PDLIM4-206ENST00000474421 RCC1P18754 421 aaPredicted RBP16.04■□□□□ 0.16
PDLIM4-206ENST00000474421 ZNF134P52741 427 aa16.04■□□□□ 0.16
PDLIM4-206ENST00000474421 PNLIPRP3Q17RR3 467 aa16.04■□□□□ 0.16
PDLIM4-206ENST00000474421 GLT8D1Q68CQ7 371 aa16.04■□□□□ 0.16
PDLIM4-206ENST00000474421 FAM53AQ6NSI3 398 aaPredicted RBP16.04■□□□□ 0.16
PDLIM4-206ENST00000474421 C8orf86Q6ZUL3 223 aa16.04■□□□□ 0.16
PDLIM4-206ENST00000474421 ZNF695Q8IW36 515 aa16.04■□□□□ 0.16
PDLIM4-206ENST00000474421 PLSCR3Q9NRY6 295 aa16.04■□□□□ 0.16
PDLIM4-206ENST00000474421 LRRC42Q9Y546 428 aa16.04■□□□□ 0.16
PDLIM4-206ENST00000474421 H0YHG0 523 aa16.03■□□□□ 0.16
PDLIM4-206ENST00000474421 EGFEM1PQ0D2K5 195 aa16.03■□□□□ 0.16
PDLIM4-206ENST00000474421 ACSM3Q53FZ2 586 aa16.03■□□□□ 0.16
PDLIM4-206ENST00000474421 CXorf66Q5JRM2 361 aaPredicted RBP16.03■□□□□ 0.16
PDLIM4-206ENST00000474421 SIGIRRQ6IA17 410 aa16.03■□□□□ 0.16
PDLIM4-206ENST00000474421 PHYHIPQ92561 330 aa16.03■□□□□ 0.16
PDLIM4-206ENST00000474421 FAM46BQ96A09 425 aa16.03■□□□□ 0.16
PDLIM4-206ENST00000474421 NEDD4LQ96PU5 975 aa16.03■□□□□ 0.16
PDLIM4-206ENST00000474421 ZMAT5Q9UDW3 170 aaKnown RBP16.03■□□□□ 0.16
PDLIM4-206ENST00000474421 JPT1Q9UK76 154 aa16.03■□□□□ 0.16
PDLIM4-206ENST00000474421 LINC01548A6NM66 108 aa16.02■□□□□ 0.16
PDLIM4-206ENST00000474421 RGS11O94810 467 aa16.02■□□□□ 0.16
PDLIM4-206ENST00000474421 CDK1P06493 297 aa16.02■□□□□ 0.16
PDLIM4-206ENST00000474421 SOX6P35712 828 aa16.02■□□□□ 0.16
PDLIM4-206ENST00000474421 VHLP40337 213 aa16.02■□□□□ 0.16
PDLIM4-206ENST00000474421 GP2P55259 537 aaKnown RBP16.02■□□□□ 0.16
PDLIM4-206ENST00000474421 HTD2P86397 168 aa16.02■□□□□ 0.16
PDLIM4-206ENST00000474421 GABPB1Q06547 395 aaPredicted RBP16.02■□□□□ 0.16
PDLIM4-206ENST00000474421 FOXE3Q13461 319 aa16.02■□□□□ 0.16
PDLIM4-206ENST00000474421 MORN2Q502X0 79 aa16.02■□□□□ 0.16
PDLIM4-206ENST00000474421 UNQ9370/PRO34162Q6UXP9 181 aa16.02■□□□□ 0.16
PDLIM4-206ENST00000474421 ABHD14AQ9BUJ0 271 aa16.02■□□□□ 0.16
PDLIM4-206ENST00000474421 ZNF736B4DX44 427 aaPredicted RBP16.01■□□□□ 0.15
PDLIM4-206ENST00000474421 K7EIL1 84 aa16.01■□□□□ 0.15
PDLIM4-206ENST00000474421 ELANEP08246 267 aa16.01■□□□□ 0.15
PDLIM4-206ENST00000474421 VDAC1P21796 283 aa16.01■□□□□ 0.15
PDLIM4-206ENST00000474421 LSAMPQ13449 338 aa16.01■□□□□ 0.15
PDLIM4-206ENST00000474421 NKAPLQ5M9Q1 402 aa16.01■□□□□ 0.15
PDLIM4-206ENST00000474421 LY6G6FQ5SQ64 297 aa16.01■□□□□ 0.15
PDLIM4-206ENST00000474421 FAM71E2Q8N5Q1 922 aa16.01■□□□□ 0.15
PDLIM4-206ENST00000474421 MRPL30Q8TCC3 161 aaKnown RBP16.01■□□□□ 0.15
PDLIM4-206ENST00000474421 P2RX4Q99571 388 aa16.01■□□□□ 0.15
PDLIM4-206ENST00000474421 SCN3BQ9NY72 215 aa16.01■□□□□ 0.15
PDLIM4-206ENST00000474421 OR5H8P0DN80 308 aa16■□□□□ 0.15
PDLIM4-206ENST00000474421 KRTAP10-11P60412 298 aa16■□□□□ 0.15
PDLIM4-206ENST00000474421 SPHARQ15513 63 aa16■□□□□ 0.15
PDLIM4-206ENST00000474421 RBM48Q5RL73 367 aaKnown RBP16■□□□□ 0.15
PDLIM4-206ENST00000474421 C6orf141Q5SZD1 244 aa16■□□□□ 0.15
PDLIM4-206ENST00000474421 C18orf65Q6ZTR6 163 aa16■□□□□ 0.15
PDLIM4-206ENST00000474421 RNF152Q8N8N0 203 aa16■□□□□ 0.15
PDLIM4-206ENST00000474421 KCNG3Q8TAE7 436 aa16■□□□□ 0.15
PDLIM4-206ENST00000474421 GALMQ96C23 342 aa16■□□□□ 0.15
PDLIM4-206ENST00000474421 CHCHD6Q9BRQ6 235 aa16■□□□□ 0.15
PDLIM4-206ENST00000474421 TMED9Q9BVK6 235 aa16■□□□□ 0.15
PDLIM4-206ENST00000474421 TMEM59Q9BXS4 323 aa16■□□□□ 0.15
PDLIM4-206ENST00000474421 ABRACLQ9P1F3 81 aa16■□□□□ 0.15
PDLIM4-206ENST00000474421 ZNF580Q9UK33 172 aa16■□□□□ 0.15
PDLIM4-206ENST00000474421 PTGES3LE9PB15 166 aa15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 CCL24O00175 119 aa15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 YPEL1O60688 119 aa15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 VSIG8P0DPA2 414 aa15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 CHATP28329 748 aa15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 HOXD3P31249 432 aaPredicted RBP15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 CDX1P47902 265 aaPredicted RBP15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 F2RL1P55085 397 aa15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 RPS27AP62979 156 aaKnown RBP15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 DCTN2Q13561 401 aaKnown RBP15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 HSD17B12Q53GQ0 312 aa15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 C1orf100Q5SVJ3 147 aa15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 LRRTM1Q86UE6 522 aa15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 OR52L2PQ8NGH6 319 aa15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 OR8U1Q8NH10 309 aa15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 YPEL2Q96QA6 119 aa15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 DCLRE1BQ9H816 532 aa15.99■□□□□ 0.15
PDLIM4-206ENST00000474421 IGHG4P01861 327 aa15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 IGF1P05019 195 aa15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 RPLP1P05386 114 aaKnown RBP15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 SRMP19623 302 aa15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 PPP1CCP36873 323 aaKnown RBP15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 INSL4Q14641 139 aa15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 GNMTQ14749 295 aa15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 MMDQ15546 238 aa15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 DEFB121Q5J5C9 76 aa15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 FAM27D1Q5T7N8 215 aa15.98■□□□□ 0.15
PDLIM4-206ENST00000474421 CEACAM19Q7Z692 300 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms