RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 C11orf87Q6NUJ2 197 aa10.6□□□□□ -0.71
CHD3-209ENST00000473376 FAM71F2Q6NXP2 309 aa10.6□□□□□ -0.71
CHD3-209ENST00000473376 C18orf65Q6ZTR6 163 aa10.6□□□□□ -0.71
CHD3-209ENST00000473376 GHITMQ9H3K2 345 aa10.6□□□□□ -0.71
CHD3-209ENST00000473376 ETAA1Q9NY74 926 aa10.6□□□□□ -0.71
CHD3-209ENST00000473376 CNOT2Q9NZN8 540 aaKnown RBP10.6□□□□□ -0.71
CHD3-209ENST00000473376 ZNF581Q9P0T4 197 aa10.6□□□□□ -0.71
CHD3-209ENST00000473376 JPT1Q9UK76 154 aa10.6□□□□□ -0.71
CHD3-209ENST00000473376 MRPS28Q9Y2Q9 187 aaKnown RBP10.6□□□□□ -0.71
CHD3-209ENST00000473376 IGHV3-72A0A0B4J1Y9 119 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 YPEL1O60688 119 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 RGS11O94810 467 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 HBZP02008 142 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 MAPK3P27361 379 aaPredicted RBP10.59□□□□□ -0.71
CHD3-209ENST00000473376 LSAMPQ13449 338 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 MORN2Q502X0 79 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 GLIPR1L1Q6UWM5 242 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 LCNL1Q6ZST4 164 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 PACRGLQ8N7B6 248 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 CCDC107Q8WV48 283 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 Q96M66 194 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 YPEL2Q96QA6 119 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 KCNIP1Q9NZI2 227 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 PEX16Q9Y5Y5 336 aa10.59□□□□□ -0.71
CHD3-209ENST00000473376 TRAV8-7A0A075B6U6 113 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 A0A1W2PP11 408 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 EFCAB10A6NFE3 127 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 IGLV1-40P01703 118 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 HLA-DRB1P01911 266 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 OR8U8P0C7N1 319 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 UBBP0CG47 229 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 PPIFP30405 207 aaKnown RBP10.58□□□□□ -0.72
CHD3-209ENST00000473376 CAPGP40121 348 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 F2RL1P55085 397 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 NPBQ8NG41 125 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 KCTD7Q96MP8 289 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 HSPB9Q9BQS6 159 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 CST11Q9H112 138 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 TAF9BQ9HBM6 251 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 OR2S2Q9NQN1 319 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 ZNF107Q9UII5 783 aaPredicted RBP10.58□□□□□ -0.72
CHD3-209ENST00000473376 SCOCQ9UIL1 159 aa10.58□□□□□ -0.72
CHD3-209ENST00000473376 ZNF736B4DX44 427 aaPredicted RBP10.57□□□□□ -0.72
CHD3-209ENST00000473376 SLC31A2O15432 143 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 PDCD6O75340 191 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 LALBAP00709 142 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 MGMTP16455 207 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 CHATP28329 748 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 CRIP2P52943 208 aaPredicted RBP10.57□□□□□ -0.72
CHD3-209ENST00000473376 AWAT2Q6E213 333 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 TMEM65Q6PI78 240 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 JAGN1Q8N5M9 183 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 TCTEX1D1Q8N7M0 179 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 TFAP2CQ92754 450 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 MUL1Q969V5 352 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 GALMQ96C23 342 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 DERL3Q96Q80 235 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 ABHD14AQ9BUJ0 271 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 PLCXD1Q9NUJ7 323 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 CLEC2DQ9UHP7 191 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 VSIG4Q9Y279 399 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 ERGIC3Q9Y282 383 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 U3KQK5 164 aa10.57□□□□□ -0.72
CHD3-209ENST00000473376 IGHV3-43A0A0B4J1X8 118 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 MAGEA13PA6NCF6 341 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 SEC14L6B5MCN3 397 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 I3L521 148 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 ITGB1BP1O14713 200 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 ARPC1BO15143 372 aaKnown RBP10.56□□□□□ -0.72
CHD3-209ENST00000473376 IGHV3-43DP0DP04 118 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 RCC1P18754 421 aaPredicted RBP10.56□□□□□ -0.72
CHD3-209ENST00000473376 ST3GAL4Q11206 333 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 KIAA0141Q14154 515 aaPredicted RBP10.56□□□□□ -0.72
CHD3-209ENST00000473376 MMDQ15546 238 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 C6orf141Q5SZD1 244 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 RNLSQ5VYX0 342 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 SIGIRRQ6IA17 410 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 ZNF833PQ6ZTB9 187 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 ZNF429Q86V71 674 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 ODF3L1Q8IXM7 274 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 MS4A15Q8N5U1 240 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 ZNF491Q8N8L2 437 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 MINDY2Q8NBR6 621 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 OR11H1Q8NG94 326 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 OR4K15Q8NH41 348 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 OR1L1Q8NH94 360 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 OR14A2Q96R54 314 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 RNF5Q99942 180 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 SELENOIQ9C0D9 397 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 OR51J1Q9H342 316 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 PIPOXQ9P0Z9 390 aa10.56□□□□□ -0.72
CHD3-209ENST00000473376 NBR2O15453 112 aa10.55□□□□□ -0.72
CHD3-209ENST00000473376 NDUFA3O95167 84 aa10.55□□□□□ -0.72
CHD3-209ENST00000473376 CD37P11049 281 aa10.55□□□□□ -0.72
CHD3-209ENST00000473376 WNT4P56705 351 aa10.55□□□□□ -0.72
CHD3-209ENST00000473376 RAB25P57735 213 aa10.55□□□□□ -0.72
CHD3-209ENST00000473376 ACTBP60709 375 aa10.55□□□□□ -0.72
CHD3-209ENST00000473376 ADARB1P78563 741 aaKnown RBP10.55□□□□□ -0.72
CHD3-209ENST00000473376 ZNF616Q08AN1 781 aa10.55□□□□□ -0.72
CHD3-209ENST00000473376 C5orf64Q2M2E5 130 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms