RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 NICN1Q9BSH3 213 aa9.22□□□□□ -0.93
CPNE1-222ENST00000473373 LINC00574Q9H8X3 128 aa9.22□□□□□ -0.93
CPNE1-222ENST00000473373 SERTAD4Q9NUC0 356 aa9.22□□□□□ -0.93
CPNE1-222ENST00000473373 STEAP1Q9UHE8 339 aa9.22□□□□□ -0.93
CPNE1-222ENST00000473373 V9GY05 133 aa9.22□□□□□ -0.93
CPNE1-222ENST00000473373 TRRAPQ9Y4A5 3859 aa9.22□□□□□ -0.93
CPNE1-222ENST00000473373 VWFP04275 2813 aa9.22□□□□□ -0.93
CPNE1-222ENST00000473373 IGHV1-3A0A0C4DH29 117 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 A0A1W2PPI3 338 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 LY6LH3BQJ8 138 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 SLC17A2O00624 439 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 SLC22A1O15245 554 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 HSPA12AO43301 675 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 TXNL1O43396 289 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 PF4V1P10720 104 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 CHATP28329 748 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 VEGFCP49767 419 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 CLDN12P56749 244 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 ZNF816Q0VGE8 651 aaPredicted RBP9.21□□□□□ -0.94
CPNE1-222ENST00000473373 SIGIRRQ6IA17 410 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 TMEM91Q6ZNR0 172 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 Q6ZS46 218 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 OR2W3Q7Z3T1 314 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 THNSL2Q86YJ6 484 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 Q8N2B8 174 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 OR4F17Q8NGA8 305 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 OR51D1Q8NGF3 324 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 OR2T10Q8NGZ9 312 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 MRPL30Q8TCC3 161 aaKnown RBP9.21□□□□□ -0.94
CPNE1-222ENST00000473373 OR4F4Q96R69 305 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 SULT4A1Q9BR01 284 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 LRRC42Q9Y546 428 aa9.21□□□□□ -0.94
CPNE1-222ENST00000473373 TCRBV4S1A1TA0A5B7 111 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 SERPINE3A8MV23 424 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 DENRO43583 198 aaKnown RBP9.2□□□□□ -0.94
CPNE1-222ENST00000473373 SC5DO75845 299 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 PF4P02776 101 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 OPN1MWP04001 364 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 OPN1MW2P0DN77 364 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 OPN1MW3P0DN78 364 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 GADD45AP24522 165 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 PPP1CCP36873 323 aaKnown RBP9.2□□□□□ -0.94
CPNE1-222ENST00000473373 GP2P55259 537 aaKnown RBP9.2□□□□□ -0.94
CPNE1-222ENST00000473373 LOXL3P58215 753 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 UNC119Q13432 240 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 Q3ZCU0 254 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 DMRTA1Q5VZB9 504 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 MOB1BQ7L9L4 216 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 NDUFA11Q86Y39 141 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 FOXRED2Q8IWF2 684 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 OR2AK2Q8NG84 335 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 OR52L2PQ8NGH6 319 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 OR56B1Q8NGI3 324 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 FAM3DQ96BQ1 224 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 CITED2Q99967 270 aaPredicted RBP9.2□□□□□ -0.94
CPNE1-222ENST00000473373 RASL11BQ9BPW5 248 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 CMSS1Q9BQ75 279 aaKnown RBP9.2□□□□□ -0.94
CPNE1-222ENST00000473373 ABHD14AQ9BUJ0 271 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 TM2D1Q9BX74 207 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 JPT1Q9UK76 154 aa9.2□□□□□ -0.94
CPNE1-222ENST00000473373 A0A075B6Q4 140 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 PSMB11A5LHX3 300 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 TMEM14DPA8MWL7 114 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 SLC31A2O15432 143 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 SOCS1O15524 211 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 MRPS14O60783 128 aaKnown RBP9.19□□□□□ -0.94
CPNE1-222ENST00000473373 CD3GP09693 182 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 RAB3BP20337 219 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 SLC35B1P78383 322 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 GNMTQ14749 295 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 MORN2Q502X0 79 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 C22orf42Q6IC83 251 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 FAM53AQ6NSI3 398 aaPredicted RBP9.19□□□□□ -0.94
CPNE1-222ENST00000473373 SLC25A48Q6ZT89 311 aaKnown RBP9.19□□□□□ -0.94
CPNE1-222ENST00000473373 SLC35E3Q7Z769 313 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 ZNF554Q86TJ5 538 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 LYPD6Q86Y78 171 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 C1QL4Q86Z23 238 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 LINC00311Q8N616 119 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 RTN4IP1Q8WWV3 396 aaPredicted RBP9.19□□□□□ -0.94
CPNE1-222ENST00000473373 FCGR1BQ92637 280 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 RIMS4Q9H426 269 aaPredicted RBP9.19□□□□□ -0.94
CPNE1-222ENST00000473373 NDUFB11Q9NX14 153 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 MGAT4AQ9UM21 535 aa9.19□□□□□ -0.94
CPNE1-222ENST00000473373 SMIM30A4D0T7 59 aa9.18□□□□□ -0.94
CPNE1-222ENST00000473373 FGF16O43320 207 aa9.18□□□□□ -0.94
CPNE1-222ENST00000473373 MOSP00540 346 aa9.18□□□□□ -0.94
CPNE1-222ENST00000473373 SSX1Q16384 188 aa9.18□□□□□ -0.94
CPNE1-222ENST00000473373 C2orf76Q3KRA6 126 aa9.18□□□□□ -0.94
CPNE1-222ENST00000473373 C5orf56Q8N8D9 126 aa9.18□□□□□ -0.94
CPNE1-222ENST00000473373 C8orf31Q8N9H6 132 aa9.18□□□□□ -0.94
CPNE1-222ENST00000473373 CFHR4Q92496 578 aa9.18□□□□□ -0.94
CPNE1-222ENST00000473373 EAF1Q96JC9 268 aaPredicted RBP9.18□□□□□ -0.94
CPNE1-222ENST00000473373 LPAR5Q9H1C0 372 aa9.18□□□□□ -0.94
CPNE1-222ENST00000473373 MBNL3Q9NUK0 354 aaKnown RBP9.18□□□□□ -0.94
CPNE1-222ENST00000473373 SLC23A1Q9UHI7 598 aa9.18□□□□□ -0.94
CPNE1-222ENST00000473373 AK3Q9UIJ7 227 aa9.18□□□□□ -0.94
CPNE1-222ENST00000473373 RAB22AQ9UL26 194 aa9.18□□□□□ -0.94
CPNE1-222ENST00000473373 SSR3Q9UNL2 185 aa9.18□□□□□ -0.94
CPNE1-222ENST00000473373 RRP15Q9Y3B9 282 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms