RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 ABHD3Q8WU67 409 aa12.14□□□□□ -0.47
NHLRC3-204ENST00000473371 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
NHLRC3-204ENST00000473371 RIMS4Q9H426 269 aaPredicted RBP12.14□□□□□ -0.47
NHLRC3-204ENST00000473371 RBKSQ9H477 322 aa12.14□□□□□ -0.47
NHLRC3-204ENST00000473371 NAT8Q9UHE5 227 aa12.14□□□□□ -0.47
NHLRC3-204ENST00000473371 ZNF407Q9C0G0 2248 aa12.14□□□□□ -0.47
NHLRC3-204ENST00000473371 SYNGR1O43759 233 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 ZNF737O75373 536 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 SERF2P84101 59 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 LRRC75BQ2VPJ9 315 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 CEACAM21Q3KPI0 293 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 TMEM41BQ5BJD5 291 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 HIST1H2AAQ96QV6 131 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 SMOC1Q9H4F8 434 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 SRD5A3Q9H8P0 318 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 CHD3Q12873 2000 aaKnown RBP12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 CD55P08174 381 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 FGF5P12034 268 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 ZNF16P17020 682 aaPredicted RBP12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 SPINK2P20155 84 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 WDR25Q64LD2 544 aaPredicted RBP12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 COLCA1Q6ZS62 124 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 HAPLN4Q86UW8 402 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 AGBL5Q8NDL9 886 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 LHX4Q969G2 390 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 ZNF488Q96MN9 340 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 SLC39A9Q9NUM3 307 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 LAMP3Q9UQV4 416 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 A0A096LPE4 126 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 A0A1W2PPZ6 126 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 C5orf49A4QMS7 147 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 RFPL3SP0C7P2 107 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 COL10A1Q03692 680 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 TCEAL6Q6IPX3 200 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 OR10V1Q8NGI7 309 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 ZNF845Q96IR2 970 aaPredicted RBP12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 PRSS50Q9UI38 385 aa12.13□□□□□ -0.47
NHLRC3-204ENST00000473371 DVL1O14640 695 aa12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 SLC31A2O15432 143 aa12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 FGF7P21781 194 aa12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 JOSD1Q15040 202 aaPredicted RBP12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 SPANXN5Q5MJ07 72 aa12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 OR1P1Q8NH06 330 aa12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 PINX1Q96BK5 328 aaKnown RBP12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 PPP1R3CQ9UQK1 317 aa12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 KLF7O75840 302 aaPredicted RBP12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 IGKV1-39P01597 117 aa12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 IGKV1D-39P04432 117 aa12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 ARF1P84077 181 aaKnown RBP12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 LSM10Q969L4 123 aaKnown RBP12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 SGCZQ96LD1 299 aa12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 OR4C12Q96R67 309 aa12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 WDR61Q9GZS3 305 aaKnown RBP12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 PRO3102Q9H379 93 aa12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 RBM7Q9Y580 266 aaKnown RBP12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 CACNA1EQ15878 2313 aa12.12□□□□□ -0.47
NHLRC3-204ENST00000473371 AMBPP02760 352 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 TLE1Q04724 770 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 HNF4GQ14541 408 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 ACSF3Q4G176 576 aaPredicted RBP12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 OR1K1Q8NGR3 316 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 RPUSD4Q96CM3 377 aaKnown RBP12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 ADGRG7Q96K78 797 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 OR1A1Q9P1Q5 309 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 UBE2L5PA0A1B0GUS4 154 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 NDUFB7P17568 137 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 ERVS71-1P61550 626 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 BSXQ3C1V8 233 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 OR5B12Q96R08 314 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 FSCN3Q9NQT6 498 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 XKRY2A2RUG3 117 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 C3orf80F5H4A9 247 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 H7BYZ3 331 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 MRPL33O75394 65 aaKnown RBP12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 IGKV1-5P01602 117 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 PFN1P07737 140 aaKnown RBP12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 FOSL1P15407 271 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 TAS2R60P59551 318 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 IL11RAQ14626 422 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 Q3ZCU0 254 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 CYP2G1PQ6ZSU1 146 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 PHF7Q9BWX1 381 aaPredicted RBP12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 KCNS2Q9ULS6 477 aa12.11□□□□□ -0.47
NHLRC3-204ENST00000473371 NCKAP5O14513 1909 aa12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 PRUNE2Q8WUY3 3088 aa12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 GZMBP10144 247 aa12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 GALR1P47211 349 aa12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 MEF2BQ02080 365 aaPredicted RBP12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 CLEC12BQ2HXU8 276 aa12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 PRR18Q8N4B5 295 aa12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 TAF15Q92804 592 aaKnown RBP eCLIP12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 ZNF552Q9H707 407 aaPredicted RBP12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 TRAV39A0A0B4J263 110 aa12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 TRAV24A0A0B4J272 114 aa12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 LRP5LA4QPB2 252 aa12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 PPP5D1E7EU14 171 aa12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 HMGB3O15347 200 aaKnown RBP12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 CYTIPO60759 359 aa12.1□□□□□ -0.47
NHLRC3-204ENST00000473371 IGFBP4P22692 258 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms