RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 LIN7CQ9NUP9 197 aaKnown RBP7.44□□□□□ -1.22
MCF2L-223ENST00000473345 CHCHD3Q9NX63 227 aaKnown RBP7.44□□□□□ -1.22
MCF2L-223ENST00000473345 BABAM2Q9NXR7 383 aa7.44□□□□□ -1.22
MCF2L-223ENST00000473345 KIAA1456Q9P272 454 aa7.44□□□□□ -1.22
MCF2L-223ENST00000473345 ZMAT5Q9UDW3 170 aaKnown RBP7.44□□□□□ -1.22
MCF2L-223ENST00000473345 GNG8Q9UK08 70 aa7.44□□□□□ -1.22
MCF2L-223ENST00000473345 NCBP2LA6PVI3 153 aaKnown RBP7.43□□□□□ -1.22
MCF2L-223ENST00000473345 MYL12BO14950 172 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 SOX15O60248 233 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 CYB5AP00167 134 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 ISG15P05161 165 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 CD1AP06126 327 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 ELANEP08246 267 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 CPEP16870 476 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 PRKACBP22694 351 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 ZNF134P52741 427 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 TMBIM6P55061 237 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 NDPQ00604 133 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 MED22Q15528 200 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 SSX1Q16384 188 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 TMPRSS11AQ6ZMR5 421 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 SLC16A12Q6ZSM3 486 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 ZNF439Q8NDP4 499 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 SPSB1Q96BD6 273 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 BCL7BQ9BQE9 202 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 ALG8Q9BVK2 526 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 FUNDC2Q9BWH2 189 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 ISG20L2Q9H9L3 353 aaKnown RBP7.43□□□□□ -1.22
MCF2L-223ENST00000473345 NEK6Q9HC98 313 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 PCDHB16Q9NRJ7 776 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 OR6C3Q9NZP0 311 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 FBXO7Q9Y3I1 522 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 AMMECR1Q9Y4X0 333 aaPredicted RBP7.43□□□□□ -1.22
MCF2L-223ENST00000473345 WSB1Q9Y6I7 421 aa7.43□□□□□ -1.22
MCF2L-223ENST00000473345 E9PI62 339 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 OGG1O15527 345 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 IGLV1-40P01703 118 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 UBCP0CG48 685 aaKnown RBP7.42□□□□□ -1.22
MCF2L-223ENST00000473345 SLC2A2P11168 524 aaPredicted RBP7.42□□□□□ -1.22
MCF2L-223ENST00000473345 GP9P14770 177 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 PSMB9P28065 219 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 CCDC58Q4VC31 144 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 PAN3Q58A45 887 aaKnown RBP7.42□□□□□ -1.22
MCF2L-223ENST00000473345 C19orf54Q5BKX5 351 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 FDX2Q6P4F2 183 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 CD200R1LQ6Q8B3 271 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 SAXO1Q8IYX7 474 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 CHST4Q8NCG5 386 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 OR1N2Q8NGR9 330 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 HAVCR2Q8TDQ0 301 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 RTN4IP1Q8WWV3 396 aaPredicted RBP7.42□□□□□ -1.22
MCF2L-223ENST00000473345 PELI1Q96FA3 418 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 MRPL48Q96GC5 212 aaKnown RBP7.42□□□□□ -1.22
MCF2L-223ENST00000473345 NDUFB11Q9NX14 153 aa7.42□□□□□ -1.22
MCF2L-223ENST00000473345 ZNF107Q9UII5 783 aaPredicted RBP7.42□□□□□ -1.22
MCF2L-223ENST00000473345 A0A1W2PP11 408 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 FAM90A10PA6NDY2 464 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 GABRPO00591 440 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 ATP6V0E1O15342 81 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 GABARAPO95166 117 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 GAPDHP04406 335 aaKnown RBP7.41□□□□□ -1.22
MCF2L-223ENST00000473345 IGF1P05019 195 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 TMEM225BP0DP42 221 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 CD36P16671 472 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 ZNF20P17024 532 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 GALP22466 123 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 TAS2R43P59537 309 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 RUNX1Q01196 453 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 PAX5Q02548 391 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 ZNF616Q08AN1 781 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 MRPL28Q13084 256 aaKnown RBP7.41□□□□□ -1.22
MCF2L-223ENST00000473345 KISS1Q15726 138 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 CTF1Q16619 201 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 GPR107Q5VW38 600 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 DMKNQ6E0U4 476 aaPredicted RBP7.41□□□□□ -1.22
MCF2L-223ENST00000473345 ELP2Q6IA86 826 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 CLVS1Q8IUQ0 354 aaPredicted RBP7.41□□□□□ -1.22
MCF2L-223ENST00000473345 LINC00311Q8N616 119 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 OR10X1Q8NGY0 326 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 RGP1Q92546 391 aaPredicted RBP7.41□□□□□ -1.22
MCF2L-223ENST00000473345 ARPC1AQ92747 370 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 ISOC1Q96CN7 298 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 C4orf36Q96KX1 117 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 NAA50Q9GZZ1 169 aaKnown RBP7.41□□□□□ -1.22
MCF2L-223ENST00000473345 NCOR1P1Q9H4R4 102 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 ZCCHC4Q9H5U6 513 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 C19orf73Q9NVV2 129 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 GFOD1Q9NXC2 390 aa7.41□□□□□ -1.22
MCF2L-223ENST00000473345 RSL24D1Q9UHA3 163 aaKnown RBP7.41□□□□□ -1.22
MCF2L-223ENST00000473345 SIRT4Q9Y6E7 314 aaPredicted RBP7.41□□□□□ -1.22
MCF2L-223ENST00000473345 IGHV4OR15-8A0A075B7B6 117 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 A0A087WW49 117 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 IGHV7-81A0A0B4J1V7 117 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 J3QLW9 94 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 OVOL1O14753 267 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 SC5DO75845 299 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 CDRT1O95170 752 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 MOSP00540 346 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 IGHV4-30-4P0DP06 118 aa7.4□□□□□ -1.22
MCF2L-223ENST00000473345 ZNF19P17023 458 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms