RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 NLRC3Q7RTR2 1065 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 OR2AK2Q8NG84 335 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 OR10A7Q8NGE5 316 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 OR10V1Q8NGI7 309 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 OR52B4Q8NGK2 314 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 COQ8AQ8NI60 647 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 SECTM1Q8WVN6 248 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 TMEM230Q96A57 120 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 GALNT14Q96FL9 552 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 AKR1E2Q96JD6 320 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 ST6GAL2Q96JF0 529 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 LINC00574Q9H8X3 128 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 SLC2A9Q9NRM0 540 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 RDH8Q9NYR8 311 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 CALYQ9NYX4 217 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 MGAT4CQ9UBM8 478 aa10.65□□□□□ -0.7
VPS13D-205ENST00000473099 TRAV39A0A0B4J263 110 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 OVOL3O00110 214 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 ITGB1BP1O14713 200 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 IFNA2P01563 188 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 CGB3P0DN86 165 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 CGB7P0DN87 165 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 SELLP14151 372 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 RBMXP38159 391 aaKnown RBP10.64□□□□□ -0.71
VPS13D-205ENST00000473099 CEACAM6P40199 344 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 CD83Q01151 205 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 C11orf91Q3C1V1 193 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 LY6G6FQ5SQ64 297 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 LIN54Q6MZP7 749 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 KCTD9Q7L273 389 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 TPRX1Q8N7U7 411 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 ZBTB34Q8NCN2 500 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 OR11H7Q8NGC8 314 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 OR52M1Q8NGK5 317 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 OR1L1Q8NH94 360 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 RTN4IP1Q8WWV3 396 aaPredicted RBP10.64□□□□□ -0.71
VPS13D-205ENST00000473099 RAB39BQ96DA2 213 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 SUCNR1Q9BXA5 334 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 GAL3ST2Q9H3Q3 398 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 NAA60Q9H7X0 242 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 PLEKHF2Q9H8W4 249 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 OR1A1Q9P1Q5 309 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 RBM7Q9Y580 266 aaKnown RBP10.64□□□□□ -0.71
VPS13D-205ENST00000473099 ARID1AO14497 2285 aa10.64□□□□□ -0.71
VPS13D-205ENST00000473099 MALRD1Q5VYJ5 2156 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 AKAP6Q13023 2319 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 TEX15Q9BXT5 2789 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 KBTBD11-OT1A0A1B0GTJ5 212 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 PPIHO43447 177 aaKnown RBP10.63□□□□□ -0.71
VPS13D-205ENST00000473099 YPEL1O60688 119 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 WNT2P09544 360 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 GIPP09681 153 aaPredicted RBP10.63□□□□□ -0.71
VPS13D-205ENST00000473099 HLA-GP17693 338 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 PI3P19957 117 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 GNRHRP30968 328 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 SSTR5P35346 364 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 RPL31P62899 125 aaKnown RBP10.63□□□□□ -0.71
VPS13D-205ENST00000473099 SRPXP78539 464 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 BVESQ8NE79 360 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 OR8B3Q8NGG8 313 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 NEIL1Q96FI4 390 aaPredicted RBP10.63□□□□□ -0.71
VPS13D-205ENST00000473099 YPEL2Q96QA6 119 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 OR8B2Q96RD0 313 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 ZNF436Q9C0F3 470 aaPredicted RBP10.63□□□□□ -0.71
VPS13D-205ENST00000473099 RANGRFQ9HD47 186 aaPredicted RBP10.63□□□□□ -0.71
VPS13D-205ENST00000473099 OR2S2Q9NQN1 319 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 CLN8Q9UBY8 286 aa10.63□□□□□ -0.71
VPS13D-205ENST00000473099 A0A1B0GW55 424 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 A0A1W2PPH5 198 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 RNF212BA8MTL3 300 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 LYNX1G3V0Z9 82 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 DVL1O14640 695 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 DUX4L2P0CJ85 424 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 DUX4L3P0CJ86 424 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 DUX4L4P0CJ87 422 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 DUX4L5P0CJ88 424 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 DUX4L6P0CJ89 424 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 DUX4L7P0CJ90 424 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 LYNX1P0DP58 116 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 RPS2P15880 293 aaKnown RBP10.62□□□□□ -0.71
VPS13D-205ENST00000473099 CDKN1AP38936 164 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 RAP2BP61225 183 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 SUPT4H1P63272 117 aaKnown RBP10.62□□□□□ -0.71
VPS13D-205ENST00000473099 Q3ZCU0 254 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 PHLDA2Q53GA4 152 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 SP5Q6BEB4 398 aaPredicted RBP10.62□□□□□ -0.71
VPS13D-205ENST00000473099 DUX4L9Q6RFH8 374 aaPredicted RBP10.62□□□□□ -0.71
VPS13D-205ENST00000473099 LYPD2Q6UXB3 125 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 LDLRAD3Q86YD5 345 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 UXS1Q8NBZ7 420 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 CASTOR1Q8WTX7 329 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 IGFBPL1Q8WX77 278 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 PSMG3-AS1Q96PY0 264 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 CCL19Q99731 98 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 BARX1Q9HBU1 254 aaPredicted RBP10.62□□□□□ -0.71
VPS13D-205ENST00000473099 RAB18Q9NP72 206 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 GNG12Q9UBI6 72 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 CTSZQ9UBR2 303 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 DUX4Q9UBX2 424 aa10.62□□□□□ -0.71
VPS13D-205ENST00000473099 IGKV1D-13A0A0B4J2D9 117 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms